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ChIP-seq
•
reset
3
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4
replies
297
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RiP RLE normalisation using spike-in peaks in DiffBind for ChIP-seq
DiffBind
SpikeIn
Normalization
ChIP-seq
csaw
6 weeks ago • updated 21 days ago
spg
• 0
0
votes
2
replies
232
views
HOMER error: Where is the file?
HOMER
chip-seq
updated 12 weeks ago by
ATpoint
★ 2.1k • written 3 months ago by
兆豪
• 0
1
vote
2
replies
316
views
Could it be possible to get an older version of ChIPQC?
ChIPQC
ChIP-seq
DiffBind
Rory_Stark
6 months ago • updated 5 months ago
etiennedanis
• 0
0
votes
5
replies
571
views
performing the differential binding in ChIP-seq
ChIP-seq
updated 7 months ago by
etiennedanis
• 0 • written 8 months ago by
Bogdan
▴ 660
0
votes
1
reply
322
views
meta-gene profiles
ChIP-seq
updated 11 months ago by
Guillaume Devailly
▴ 60 • written 11 months ago by
Bogdan
▴ 660
5 results • Page
1 of 1
Recent ...
Replies
Comment: edgeR supports continuous covariates?
by
Jeffcgen2000
• 0
Hi Yunshun Chen and Gordon Smyth, does edgeR support mixed model? (https://en.wikipedia.org/wiki/Mixed_model)
Comment: find tandem repeats in DNA
by
me-nobody
• 0
OK. Thank you very much!
Comment: How to normalize long-read RNA-seq data for comparison with short-reads
by
Bernardo
• 0
Discussion for this question continuing on Biostars: https://www.biostars.org/p/9552419/
Comment: What is the difference between these two arguments for log fold change shrinkage
by
Michael Love
39k
Can you describe how the plots are different?
Answer: find tandem repeats in DNA
by
ATpoint
★ 2.1k
This is not related to Bioconductor so I suggest posting at biostars.org.
Votes
Answer: on which data type limma::removeBatchEffect can be applyed?
C: WGCNA: Understanding module-trait correlations
A: WGCNA: Understanding module-trait correlations
A: Differential expression analysis starting from TPM data
Comment: MSc student
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