Bioconductor Cheminformatics

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software error R cheminformatics package installation eiR

updated 7.9 years ago by khoran • 0 • written 7.9 years ago by rjrich • 0

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1.3k

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Metabolomics Cheminformatics Visualization xcms Metabolomics Cheminformatics Visualization

14.2 years ago Gabriella Rustici ▴ 60

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1.2k

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Cheminformatics Visualization Cancer Ovarian DEXSeq minfi DESeq2 BaseSpaceR epivizr minfi

10.8 years ago Martin Morgan 25k

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1.1k

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cellhts2 cheminformatics

updated 7.4 years ago by Joseph Barry ▴ 160 • written 7.4 years ago by Andreia Fonseca ▴ 810

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946

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Cheminformatics Clustering Cheminformatics Clustering

16.6 years ago Thomas Girke ★ 1.7k

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891

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bioassayr chemmineR cheminformatics

5.1 years ago Anthony Nash ▴ 20

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872

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Cheminformatics Clustering Cheminformatics Clustering

15.8 years ago Thomas Girke ★ 1.7k

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809

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cheminf ChemmineOB Cheminformatics ChemmineR

2.7 years ago adelenelai • 0

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684

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limma edger deseq2 cheminformatics

updated 5.7 years ago by Aaron Lun ★ 28k • written 5.7 years ago by perdedorium • 0

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276

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Cheminformatics ChemmineR ChemmineDrugs

8 months ago Sean • 0

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Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Comment: Limma design with continuous and categorical covariates by hortense96 • 0

Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …

Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

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Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

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Scholar to Gordon Smyth 50k