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Chimera
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Problem with prettyPrint (Chimera)
prettyPrint
Chimera
updated 6.7 years ago by
mrp
• 0 • written 7.1 years ago by
anders
• 0
1
vote
4
replies
1.7k
views
chimera error after update to R 3.2
chimera
IRanges
updated 8.3 years ago by
raffaele calogero
▴ 500 • written 8.8 years ago by
kelly.rabionet
▴ 10
0
votes
5
replies
2.8k
views
Problem Importing STAR fusion data into chimera
fusion genes
chimera
star
updated 9.1 years ago by
richa_r
• 0 • written 9.4 years ago by
am26
• 0
1
vote
5
replies
2.2k
views
Single end STAR Chimeric.out.junction fails to read with chimera::importFusionData
chimera
STAR
updated 9.1 years ago by
rcaloger
▴ 500 • written 9.2 years ago by
wresch
• 0
0
votes
0
replies
1.7k
views
News:
RNAseq data analysis courses: Torino (Italy) : Beginner course March 17-19 2015 & Advance Course April 14-16 2015
rnaseq
mirna
onechannelgui
chimera
News
9.2 years ago
raffaele calogero
▴ 500
0
votes
1
reply
1.8k
views
molecular viz tools (eg, PyMol) and R?
chimera
chimera
updated 15.7 years ago by
Thomas Girke
★ 1.7k • written 15.7 years ago by
Paul Shannon
★ 1.1k
6 results • Page
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Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Votes
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
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