Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Chromosome
•
reset
0
votes
2
replies
542
views
How to find the number of protein-coding genes in each chromosome arm in human?
gene
chromosome
proteincodinggene
12 months ago
Liliian
• 0
3
votes
5
replies
1.8k
views
Splitting a TxDB or GRanges by Chromosome
GenomicRanges
split
chromosome
TxDb
updated 2.4 years ago by
Hervé Pagès
16k • written 2.4 years ago by
jon.klonowski
▴ 40
5
votes
4
replies
9.7k
views
Getting rs ids using chr coordinates | Biomart
SNP
rs id
Biomart
Chromosome
coordinates
updated 9 months ago by
James W. MacDonald
65k • written 3.7 years ago by
Mahan
• 0
0
votes
4
replies
772
views
Genomic Annotation Package Ensembl
Chromosome
Annotation
updated 3.7 years ago by
James W. MacDonald
65k • written 3.7 years ago by
Bine
▴ 40
0
votes
2
replies
773
views
Parsing error creating tx2gene object for tximport
tximport
GCF feature table
parsing error
chromosome
updated 4.0 years ago by
Michael Love
41k • written 4.0 years ago by
knholm
• 0
0
votes
0
replies
504
views
Conversion of RefSeq data to chromosomal position
RefSeq
Chromosome
Mutalyzer
4.0 years ago
heiko_kin
▴ 60
1
vote
1
reply
487
views
Differential Expression by Chromosome using edgeR
edgeR
chromosome
RNAseq
updated 4.1 years ago by
swbarnes2
★ 1.3k • written 4.1 years ago by
missmoparker
• 0
0
votes
1
reply
785
views
Understand the chromosome name in homo sapiens gene database
homo sapiens
chromosome
updated 5.9 years ago by
James W. MacDonald
65k • written 5.9 years ago by
xchen8
• 0
2
votes
3
replies
1.9k
views
What's the best way to retrieve the sizes (lengths) of chromosomes for a reference genome assembly?
bsgenome
chromosome
reference genome
updated 6.1 years ago by
Hervé Pagès
16k • written 6.2 years ago by
Nathan Sheffield
▴ 10
1
vote
5
replies
2.5k
views
how to plot human genome chromosome Ideogram with each length by Gviz
Gviz
chromosome
ideogram
updated 7.1 years ago by
bernatgel
▴ 150 • written 7.2 years ago by
dulunar
▴ 10
10 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
swbarnes2
★ 1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong. Are you sure this step isn't misla…
Comment: get BM error
by
James W. MacDonald
65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Comment: get BM error
by
Fara
• 0
Thank you for your response. The primary reason for translating Ensembl IDs into Entrez Gene IDs is to perform KEGG (Kyoto Encyclopedia of…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
James W. MacDonald
65k
That's weird. I don't have any problem at all generating the `OrgDb` on my box. How big is the gene2pubmed.gz file? I get this: ``` gzip -…
Votes
Answer: get BM error
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
Comment: Different Shrunk Log2FC according with reference
Reproducibility issue with scran together with lapply and BiocParallel
C: SGSeq: moving toward diffex from SGSeq analysis
Awards
• All
Popular Question
to
Bine
▴ 40
Scholar
to
ATpoint
★ 4.0k
Popular Question
to
Gordon Smyth
50k
Popular Question
to
i.sudbery
▴ 40
Scholar
to
Michael Love
41k
Locations
• All
United States,
6 minutes ago
France,
9 minutes ago
Denver, University of Colorado Anschutz Medical Campus,
10 minutes ago
United States,
21 minutes ago
India,
22 minutes ago
Traffic: 904 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6