Bioconductor Chromosome

Showing : Chromosome • reset

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535

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gene chromosome proteincodinggene

12 months ago Liliian • 0

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1.8k

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GenomicRanges split chromosome TxDb

updated 2.3 years ago by Hervé Pagès 16k • written 2.3 years ago by jon.klonowski ▴ 40

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9.6k

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SNP rs id Biomart Chromosome coordinates

updated 9 months ago by James W. MacDonald 65k • written 3.7 years ago by Mahan • 0

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767

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Chromosome Annotation

updated 3.7 years ago by James W. MacDonald 65k • written 3.7 years ago by Bine ▴ 40

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766

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tximport GCF feature table parsing error chromosome

updated 4.0 years ago by Michael Love 41k • written 4.0 years ago by knholm • 0

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500

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RefSeq Chromosome Mutalyzer

4.0 years ago heiko_kin ▴ 60

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484

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edgeR chromosome RNAseq

updated 4.0 years ago by swbarnes2 ★ 1.3k • written 4.0 years ago by missmoparker • 0

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780

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homo sapiens chromosome

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by xchen8 • 0

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1.8k

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bsgenome chromosome reference genome

updated 6.1 years ago by Hervé Pagès 16k • written 6.1 years ago by Nathan Sheffield ▴ 10

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2.5k

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Gviz chromosome ideogram

updated 7.1 years ago by bernatgel ▴ 150 • written 7.2 years ago by dulunar ▴ 10

10 results • Page 1 of 1

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Comment: Differential peaks that were not identified in diffbind were identified in diseq by ATpoint ★ 4.0k

As expected normalization is **way** off, meaning in simple terms that the cloud is too high. The deep-blue area should be along y=0. Try t…

Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0

Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…

Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k

I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …

Comment: Theoretical WGCNA Question by Garrett • 0

Thanks Peter!

Comment: FGSEA pre-ranked input in increasing order or decreasing by sropri • 0

Thank you!

Votes

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Comment: DEXSeq DEXSeqDataSet count matrix duplication

Comment: Error in champ.load(): The following specified files do not exist

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