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News: EuroBioC2023 abstract submission is open!
presentation EuroBioC2023 Conference community Bioconductor
written 2.9 years ago by ▴ 110
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2
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616
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GBCC2025: New Scholarship Opportunities Available!
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updated 5 months ago by • 0 • written 8 months ago by ▴ 110
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News: EuroBioC2025: Abstract Submissions Open!
EuroBioC2025 Community Conference Bioconductor
11 months ago Maria Doyle ▴ 110
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552
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News: GBCC2025 Abstract Submissions & Registration Now Open!
Community Conference GBCC2025 Bioconductor
11 months ago Maria Doyle ▴ 110
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328
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News: Announcing the GBCC2025 Logo Design Winner!
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11 months ago Maria Doyle ▴ 110
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News: Bioconductor Course, Kenya 2025: Applications Open!
Events Community Training Africa Bioconductor
11 months ago Maria Doyle ▴ 110
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News: EuroBioC2023 abstract submission closing soon!
presentation EuroBioc2023 Conference community Bioconductor
written 2.8 years ago by ▴ 110
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604
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News: Announcing the GBCC2025 Logo Design Contest!
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15 months ago Maria Doyle ▴ 110
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News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
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News: Save the Date for EuroBioC2025 in Barcelona!
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16 months ago Maria Doyle ▴ 110
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4
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News: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
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updated 3 months ago by • 0 • written 16 months ago by ▴ 110
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News: BioCAsia 2024 Registration Now Open!
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17 months ago Maria Doyle ▴ 110
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BioCAsia 2024 Abstract Deadline - August 26th
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17 months ago Maria Doyle ▴ 110
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772
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News: EuroBioC Updates: Important Deadlines
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17 months ago Maria Doyle ▴ 110
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585
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EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
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17 months ago Maria Doyle ▴ 110
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18 months ago Maria Doyle ▴ 110
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News: BioC2024 in-person registration closes soon (July 10)
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18 months ago Maria Doyle ▴ 110
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544
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EuroBioC2024 Registration is Open!
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20 months ago Maria Doyle ▴ 110
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News: BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
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News: BioC2024 deadlines approaching
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817
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News: BioC2024 registration is now open!
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900
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News: Bioconductor.org website new design - We Need Your Input!
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
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2.7 years ago Maria Doyle ▴ 110
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2.7 years ago Maria Doyle ▴ 110
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2.7 years ago Maria Doyle ▴ 110
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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2.7 years ago Maria Doyle ▴ 110
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News: BioC2023 abstract submission is now open!
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updated 17 months ago by • 0 • written 3.0 years ago by ▴ 110
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858
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2.9 years ago Maria Doyle ▴ 110
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News: Join the Community Advisory Board -- upcoming elections -- deadline Today
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Job: Bioconductor Community Manager
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3.7 years ago • updated 3.6 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board -- Deadline this Friday February 25
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3.9 years ago shepherl 4.3k
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News: Join the Bioconductor Community Advisory Board
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4.0 years ago • updated 3.9 years ago shepherl 4.3k
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News: Call for Community Volunteered Package Reviewers
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News: Nominations for Bioconductor Technical Advisory Board are open
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News: Community engagement, outreach, and diversity award
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4.7 years ago shepherl 4.3k
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News: New Bioconductor Community Advisory Board Members for 2021
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4.8 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board
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News: Community engagement and outreach award
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News: Bioconductor Community Advisory Board Members
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5.8 years ago Matthew Ritchie ▴ 1000
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News: Bioconductor Community Advisory Board Nominees
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updated 6.0 years ago by 21k • written 6.0 years ago by ▴ 1000
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News: Results: Bioconductor Community Survey
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6.0 years ago Matthew Ritchie ▴ 1000
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News: Bioconductor Community Survey
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6.3 years ago Matthew Ritchie ▴ 1000
45 results • Page 1 of 1
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Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k
You just need the mouse identifier (controls baseline) and the group specific allelic effect.
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Julia Broadbent • 0
Hi Emily, Just sharing a resource for handling contaminants - we use the methods described in [Frankenfield et al. (2022)](https://pubs.acs…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k
You may want to speak with a local statistician, because you don't just want to find the first full rank matrix and run with that if it doe…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
It is fine for your mass spec facility to include blank samples as part of their internal QC, but such samples should not in my opinion be …
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0
Hm, okay, in building a fake model by hand I think I'm realizing the problem: `mouse` and its variants are ideally acting as basically a ra…
Votes
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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