Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Complexheatmap
•
reset
0
votes
5
replies
2.0k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
7.0 years ago
AR3513
• 0
1
vote
4
replies
4.0k
views
complexHeatmap - distance calculation
complexheatmap
8.2 years ago
annkatrin.goepfert
▴ 10
0
votes
6
replies
4.6k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 4.6 years ago by
Zuguang Gu
▴ 260 • written 4.6 years ago by
AB
▴ 110
2
votes
5
replies
1.5k
views
ComplexHeatmap - z-score color coding failed
heatmaps
ComplexHeatmap
16 months ago
Katharina
• 0
1
vote
5
replies
8.7k
views
How to add both row and column labels to Complexheatmap
complexheatmap
labels
6.6 years ago
dilawerkh4
• 0
1
vote
2
replies
2.3k
views
legend with gradient in ComplexHeatmap
complexheatmap
6.8 years ago
AR3513
• 0
2
votes
3
replies
2.2k
views
Complexheatmap row-names not showing up
ComplexHeatmap
22 months ago
krushnach80
• 0
1
vote
2
replies
1.9k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap
bug
7.2 years ago
brt381
• 0
0
votes
1
reply
1.1k
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 7.1 years ago by
Steve Lianoglou
★ 13k • written 7.1 years ago by
d r
▴ 150
8
votes
1
reply
9.2k
views
extracting the genes associated with the clusters
heatmap.2
pheatmap
complexheatmap
heatplus
updated 7.1 years ago by
Gavin Kelly
▴ 680 • written 7.1 years ago by
Bogdan
▴ 670
2
votes
2
replies
1.3k
views
about reshaping a data frame
maftools
complexheatmap
updated 6.8 years ago by
Haiying.Kong
▴ 110 • written 6.8 years ago by
Bogdan
▴ 670
2
votes
2
replies
2.1k
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 8 months ago by
franciscaelibethgalvez
• 0 • written 21 months ago by
nalaspina
▴ 10
0
votes
1
reply
1.2k
views
Annotated heatmap limits
complexheatmap
updated 8.4 years ago by
Steve Lianoglou
★ 13k • written 8.4 years ago by
michael.ridley6
• 0
5
votes
2
replies
13k
views
Complex Heatmap - hide one legend, show 2 - out off three annotations
complexheatmap
bioconductor
annotation
heatmap
legend
7.9 years ago • updated 7.8 years ago
annkatrin.goepfert
▴ 10
5
votes
5
replies
4.1k
views
ComplexHeatmap - Heatmap function within a for loop
ComplexHeatmap
for loop
Heatmap function
updated 21 months ago by
krushnach80
• 0 • written 7.7 years ago by
An De Bondt
▴ 40
3
votes
4
replies
6.3k
views
ComplexHeatmap - Annotation without a named vector
complexheatmap
updated 7.7 years ago by
jokergoo
▴ 200 • written 7.7 years ago by
andrew.j.skelton73
▴ 370
3
votes
2
replies
18k
views
Plotting several heatmaps onto the same grid with the ComplexHeatmap package in R
complexheatmap
updated 7.6 years ago by
jokergoo
▴ 200 • written 7.6 years ago by
chriad
▴ 10
0
votes
1
reply
1.5k
views
How to manage multiple legends in heatmap_legend_param (ComplexHeatmap) ?
ComplexHeatmap
complexheatmap
7.6 years ago
g.atla
▴ 10
2
votes
1
reply
3.5k
views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap
heatmap.2
dendrogram
dendextend
heatmap
updated 7.5 years ago by
jokergoo
▴ 200 • written 7.5 years ago by
enricoferrero
▴ 660
2
votes
1
reply
3.8k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 5.1 years ago by
Zuguang Gu
▴ 260 • written 5.1 years ago by
Vinicius Henrique da Silva
▴ 40
4
votes
3
replies
2.8k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap
r
updated 4.9 years ago by
Zuguang Gu
▴ 260 • written 4.9 years ago by
Ram
▴ 190
0
votes
1
reply
797
views
ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
updated 4.9 years ago by
Zuguang Gu
▴ 260 • written 4.9 years ago by
shbrief
▴ 20
3
votes
2
replies
6.7k
views
ComplexHeatmap removes row labels if annotation is added
annotation
show_row_names
complexheatmap
4.7 years ago
alexw858
• 0
3
votes
7
replies
3.1k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix
heatmap
ComplexHeatmap
missing values
R
updated 4.6 years ago by
Zuguang Gu
▴ 260 • written 4.6 years ago by
mohammedtoufiq91
▴ 10
3
votes
2
replies
2.1k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger
complexheatmap
R
clustering
updated 4.0 years ago by
Gordon Smyth
50k • written 4.0 years ago by
eggrandio
• 0
1
vote
6
replies
9.8k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r
rnaseq
complexHeatmap
annotation
updated 3.8 years ago by
Zuguang Gu
▴ 260 • written 3.8 years ago by
camillab.
▴ 10
0
votes
2
replies
11k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 3.8 years ago by
Zuguang Gu
▴ 260 • written 3.8 years ago by
AR3513
• 0
2
votes
4
replies
5.9k
views
Complexheatmap Installation Issue
ComplexHeatmap
3.3 years ago
legro.melanie
• 0
0
votes
1
reply
2.0k
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
3.1 years ago
vanbelj
▴ 30
4
votes
4
replies
9.2k
views
ComplexHeatmap Scale by Row
ComplexHeatmap
heatmap
updated 8.9 years ago by
James W. MacDonald
65k • written 8.9 years ago by
andrew.j.skelton73
▴ 370
3
votes
2
replies
2.0k
views
Complex Heatmap shows just one color
Heatmap
ComplexHeatmap
colorRamp
3.0 years ago
Assa Yeroslaviz
★ 1.5k
3
votes
3
replies
3.0k
views
ComplexHeatmap install error
ComplexHeatmap
updated 22 months ago by
James W. MacDonald
65k • written 22 months ago by
nalaspina
▴ 10
2
votes
3
replies
214
views
ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with variable number of continuous columns
ComplexHeatmap
2 days ago • updated 1 day ago
daniel.carbajo
• 0
2
votes
2
replies
286
views
ComplexHeatmap crashing R session
ComplexHeatmap
10 weeks ago
Felipe
• 0
2
votes
3
replies
934
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma
heatmaps
ComplexHeatmap
updated 14 months ago by
elefth.pavlos
▴ 40 • written 14 months ago by
Sooni
▴ 10
3
votes
4
replies
2.8k
views
ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap
Complex
updated 14 months ago by
elefth.pavlos
▴ 40 • written 14 months ago by
Katharina
• 0
2
votes
2
replies
122
views
ComplexHeatmap: change the names of a HeatmapAnnotation object
ComplexHeatmap
5 days ago • updated 2 days ago
daniel.carbajo
• 0
0
votes
2
replies
1.7k
views
Extracting subclusters from original data
complexheatmap
metabolomics
updated 6.7 years ago by
sina.nassiri
▴ 130 • written 6.7 years ago by
Mina
• 0
2
votes
3
replies
2.1k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap
maftools
updated 6.7 years ago by
anand_mt
▴ 90 • written 6.7 years ago by
Bogdan
▴ 670
0
votes
1
reply
1.8k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
6.6 years ago
Bogdan
▴ 670
5
votes
12
replies
10k
views
Combining ComplexHeatmap with other plot types
complexheatmap
ggplot2
updated 6.4 years ago by
Zuguang Gu
▴ 260 • written 6.4 years ago by
my4
▴ 10
0
votes
2
replies
1.6k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 6.1 years ago by
jokergoo
▴ 200 • written 6.1 years ago by
James W. MacDonald
65k
0
votes
1
reply
1.5k
views
Oncoprint function in ComplexHeatmap
complexheatmap
6.9 years ago
Bogdan
▴ 670
0
votes
0
replies
908
views
Boxplot annotation per cluster and column using ComplexHeatmap
ComplexHeatmap
20 months ago
gdeniz
• 0
0
votes
1
reply
1.4k
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap
UpSet
3.9 years ago
moldach
▴ 20
0
votes
0
replies
1.2k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 6.6 years ago by
Gordon Smyth
50k • written 6.6 years ago by
johnnytam100
• 0
3
votes
2
replies
4.3k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
6.6 years ago
CodeAway
▴ 70
1
vote
1
reply
2.0k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap
Anno
Annotation
updated 2.6 years ago by
Zuguang Gu
▴ 260 • written 2.6 years ago by
Ashish Jain
▴ 10
0
votes
0
replies
1.5k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
6.6 years ago
Luiz
• 0
0
votes
1
reply
1.1k
views
Error in Heatmap...
complexheatmap
7.1 years ago
baranikumar22
• 0
50 results • Page
1 of 1
Recent ...
Replies
Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
Awards
• All
Popular Question
to
paria.alipour
• 0
Popular Question
to
Eman
• 0
Popular Question
to
James W. MacDonald
65k
Scholar
to
nhaus
▴ 30
Popular Question
to
shepherl
3.8k
Locations
• All
France,
just now
United States,
43 minutes ago
United States,
48 minutes ago
United States,
58 minutes ago
WEHI, Melbourne, Australia,
1 hour ago
Traffic: 492 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6