Showing : Complexheatmap • reset
2
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3
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ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with variable number of continuous columns
ComplexHeatmap
3 days ago • updated 2 days ago daniel.carbajo • 0
2
votes
2
replies
123
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ComplexHeatmap: change the names of a HeatmapAnnotation object
ComplexHeatmap
5 days ago • updated 3 days ago daniel.carbajo • 0
2
votes
2
replies
287
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ComplexHeatmap crashing R session
ComplexHeatmap
10 weeks ago Felipe • 0
2
votes
2
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2.1k
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ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 8 months ago by • 0 • written 21 months ago by ▴ 10
2
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3
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934
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How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 14 months ago by ▴ 40 • written 14 months ago by ▴ 10
3
votes
4
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2.8k
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ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap Complex
updated 14 months ago by ▴ 40 • written 14 months ago by • 0
2
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5
replies
1.5k
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ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
16 months ago Katharina • 0
2
votes
5
replies
3.2k
views
News: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr ATACSeq DiffBind ComplexHeatmap ChIPSeq
updated 16 months ago by • 0 • written 2.9 years ago by ★ 5.1k
0
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1
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1.4k
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Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 19 months ago by ▴ 260 • written 20 months ago by • 0
0
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0
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908
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Boxplot annotation per cluster and column using ComplexHeatmap
ComplexHeatmap
20 months ago gdeniz • 0
5
votes
5
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4.1k
views
ComplexHeatmap - Heatmap function within a for loop
ComplexHeatmap for loop Heatmap function
updated 21 months ago by • 0 • written 7.7 years ago by ▴ 40
3
votes
3
replies
3.0k
views
ComplexHeatmap install error
ComplexHeatmap
updated 22 months ago by 65k • written 22 months ago by ▴ 10
2
votes
3
replies
2.2k
views
Complexheatmap row-names not showing up
ComplexHeatmap
22 months ago krushnach80 • 0
1
vote
1
reply
2.0k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap Anno Annotation
updated 2.6 years ago by ▴ 260 • written 2.6 years ago by ▴ 10
1
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0
replies
1.0k
views
ComplexHeatmap: Swapping between left_annotation and right_annotation results in a blank space
anno_block ComplexHeatmap left_annotation right_annotation
2.8 years ago glich • 0
3
votes
2
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2.0k
views
Complex Heatmap shows just one color
Heatmap ComplexHeatmap colorRamp
3.0 years ago Assa Yeroslaviz ★ 1.5k
0
votes
1
reply
2.0k
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
3.1 years ago vanbelj ▴ 30
2
votes
4
replies
5.9k
views
Complexheatmap Installation Issue
ComplexHeatmap
3.3 years ago legro.melanie • 0
0
votes
0
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632
views
How to show rownames in densityheatmaps
ComplexHeatmap
3.4 years ago adR ▴ 30
0
votes
2
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1.1k
views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap R
3.6 years ago pthom010 • 0
0
votes
2
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11k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 3.8 years ago by ▴ 260 • written 3.8 years ago by • 0
1
vote
6
replies
9.8k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r rnaseq complexHeatmap annotation
updated 3.8 years ago by ▴ 260 • written 3.8 years ago by ▴ 10
0
votes
1
reply
1.4k
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap UpSet
3.9 years ago moldach ▴ 20
3
votes
2
replies
2.1k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger complexheatmap R clustering
updated 4.0 years ago by 50k • written 4.0 years ago by • 0
0
votes
6
replies
4.6k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 4.6 years ago by ▴ 260 • written 4.6 years ago by ▴ 110
3
votes
7
replies
3.1k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 4.6 years ago by ▴ 260 • written 4.6 years ago by ▴ 10
3
votes
2
replies
6.7k
views
ComplexHeatmap removes row labels if annotation is added
annotation show_row_names complexheatmap
4.7 years ago alexw858 • 0
0
votes
1
reply
797
views
ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
updated 4.9 years ago by ▴ 260 • written 4.9 years ago by ▴ 20
4
votes
3
replies
2.8k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap r
updated 4.9 years ago by ▴ 260 • written 4.9 years ago by ▴ 190
0
votes
1
reply
2.2k
views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap software error
updated 5.0 years ago by 65k • written 5.0 years ago by • 0
2
votes
1
reply
3.8k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 5.1 years ago by ▴ 260 • written 5.1 years ago by ▴ 40
0
votes
1
reply
1.2k
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
5.2 years ago Goku • 0
0
votes
2
replies
1.6k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 6.1 years ago by ▴ 200 • written 6.1 years ago by 65k
5
votes
12
replies
10k
views
Combining ComplexHeatmap with other plot types
complexheatmap ggplot2
updated 6.4 years ago by ▴ 260 • written 6.4 years ago by ▴ 10
1
vote
5
replies
8.7k
views
How to add both row and column labels to Complexheatmap
complexheatmap labels
6.6 years ago dilawerkh4 • 0
0
votes
0
replies
1.5k
views
Problem with heatmap by ComplexHeatmap
complexheatmap Rstudio NOISeq
6.6 years ago Luiz • 0
0
votes
1
reply
1.8k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
6.6 years ago Bogdan ▴ 670
3
votes
2
replies
4.3k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
6.6 years ago CodeAway ▴ 70
0
votes
0
replies
1.2k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 6.6 years ago by 50k • written 6.6 years ago by • 0
2
votes
3
replies
2.1k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap maftools
updated 6.7 years ago by ▴ 90 • written 6.7 years ago by ▴ 670
0
votes
2
replies
1.7k
views
Extracting subclusters from original data
complexheatmap metabolomics
updated 6.7 years ago by ▴ 130 • written 6.7 years ago by • 0
1
vote
2
replies
2.3k
views
legend with gradient in ComplexHeatmap
complexheatmap
6.8 years ago AR3513 • 0
2
votes
2
replies
1.3k
views
about reshaping a data frame
maftools complexheatmap
updated 6.8 years ago by ▴ 110 • written 6.8 years ago by ▴ 670
0
votes
1
reply
1.5k
views
Oncoprint function in ComplexHeatmap
complexheatmap
6.9 years ago Bogdan ▴ 670
0
votes
5
replies
2.0k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
7.0 years ago AR3513 • 0
0
votes
1
reply
1.1k
views
Error in Heatmap...
complexheatmap
7.1 years ago baranikumar22 • 0
8
votes
1
reply
9.2k
views
extracting the genes associated with the clusters
heatmap.2 pheatmap complexheatmap heatplus
updated 7.1 years ago by ▴ 680 • written 7.1 years ago by ▴ 670
0
votes
1
reply
1.1k
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 7.1 years ago by ★ 13k • written 7.1 years ago by ▴ 150
1
vote
2
replies
1.9k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap bug
7.2 years ago brt381 • 0
2
votes
1
reply
3.5k
views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap heatmap.2 dendrogram dendextend heatmap
updated 7.5 years ago by ▴ 200 • written 7.5 years ago by ▴ 660
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Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures by Gordon Smyth 50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma by Gordon Smyth 50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Comment: Single-Cell Data Simulation from Bulk RNA-seq by wichaidi • 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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