Bioconductor Conda

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biocinstaller installation install source conda

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by jol.espinoz ▴ 40

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deseq2 conda

6.5 years ago adam.cribbs ▴ 10

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diffHic conda

updated 5.6 years ago by Aaron Lun ★ 28k • written 5.6 years ago by smithgr • 0

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DiffBind conda

updated 4.0 years ago by Rory Stark ★ 5.2k • written 4.0 years ago by Benjamin Ostendorf ▴ 90

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dada2 conda phyloseq

updated 4.0 years ago by James W. MacDonald 68k • written 4.0 years ago by Daniel • 0

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1.4k

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Conda affyio error

6.4 years ago benjamin.saintpierre • 0

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bioconductor biocinstaller installation conda

7.1 years ago jol.espinoz ▴ 40

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Comment: Merging EPICV1 and V2 betas by Garbayo • 0

[BitLife][1]: Life Simulator, usually referred to as BitLife, is a mobile life simulator game created by developer CandyWriter LLC on Septe…

Comment: Package developing and interoperation with Bioconductor by shepherl 4.1k

Using an example with SummarizedExperiment would satisfy the requirement; however the package should take the object directly and not just…

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Sofia • 0

1. I have tried to update the packages and R but to no avail. I keep getting either this error or : `Error in H5Fclose(file$H5Identifier) …

Comment: Validity of SingleR with very small bulk RNAseq reference by Rohit • 0

Hi @nhaus So, what did you end up doing in such a scenario? I am facing a similar challenge

Comment: CpGs with genomic positions greater than the chromosome size in EPICv2? by Joshua Llano • 0

Thank you for your reply James. I was worried that it was my mistake.

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Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?

Answer: Explannation for ROAST results

A: How DiffBind run PCA based on peak data?

Looking for equivalent EPIC chip v1 vs. v2 annotation variables

Properly constructing a hypergeometric test

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