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News: Bioinformatics Summer School - July 2020 - UCLouvain (Belgium)
rnaseq
course
proteomics
transcriptomics
scrnaseq
News
4.2 years ago
Laurent Gatto
1.6k
2
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1.2k
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News:
LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news
proteomics
course
training
msstats
News
6.2 years ago
mnchoi67
▴ 40
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1.9k
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News:
May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor
training
course
msstats
proteomics
News
6.3 years ago
mnchoi67
▴ 40
0
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5
replies
1.7k
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BioC happening in 2018?
BioC
2018
Course
6.7 years ago
s.munster
▴ 40
4
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1
reply
1.8k
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News:
Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
course
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7.2 years ago • updated 7.1 years ago
Laurent Gatto
1.6k
0
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0
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1.6k
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News:
Workshop: microRNA Analysis Using Next-Generation Sequencing - From microRNA profiling and prediction to extensive downstream analyses
Workshop
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News
7.8 years ago
adele.feuerstein
• 0
2
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1.4k
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News:
Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
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8.1 years ago
Mark Dunning
★ 1.1k
3
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1.4k
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News:
Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
course
training
News
8.2 years ago
Martin Morgan
25k
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2
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1.5k
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News:
Looking to attend to a Bioconductor course for biologists in Europe
course
News
updated 8.9 years ago by
andrew.j.skelton73
▴ 370 • written 8.9 years ago by
laianavarromartin
▴ 20
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1.5k
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News:
4 days left to register for a short course on computational proteomics
proteomics
news
course
massspectrometry
News
9.1 years ago
Olga Vitek
▴ 40
0
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1.3k
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News:
Course Announcement: Use R / Bioconductor for Sequence Analysis (Intermediate Course)
Course
RNA-Seq
Chip-seq
Parallel
News
9.1 years ago
Martin Morgan
25k
0
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0
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1.4k
views
News:
An introductory course to RNA-seq 17-19 March 2015
rna-seq
course
News
9.2 years ago
rcaloger
▴ 500
0
votes
0
replies
1.9k
views
News:
Course announcement: CSAMA 2015 (13th ed.) Statistics and Computing in Genome Data Science
Course
News
9.2 years ago
Wolfgang Huber
★ 13k
4
votes
0
replies
1.5k
views
News:
Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
Course
News
9.5 years ago
Wolfgang Huber
★ 13k
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Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
41k
"gene_counts_length_scaled.tsv file generated by the nf-core be exactly that?" No that is the counts scaled by the length. Counts + offset…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
These genes are fine. They are just the ones where, by chance, the sample variance is below the sample mean. It happens. DESeq2 brings thes…
Comment: DEG with low counts
by
Michael Love
41k
These counts are too low, only a few samples above a count of 10. So for typical RNA-seq data that is underpowered to call differences. It…
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
If the counts are too low it in one group then you can't make the comparison either way (whether they are filtered out or just under-powere…
Comment: Estimating Cell Counts for EPIC V2 array data
by
normawiedman059
• 0
0 [103] spam_2.9-1 doParallel_1.0.17 iterators_1.0.14 [106] foreach_1.5.2 beeswarm_0.4.0 tgp_2.4-20 [109] beanplot_1.3.1 fpc_2.2-9 dbscan_1…
Votes
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
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