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DAVID
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1.2k
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Bioconductor package to access DAVID tool
DAVID
updated 2.7 years ago by
shepherl
3.8k • written 2.7 years ago by
deepue
▴ 10
0
votes
0
replies
865
views
RDAVIDWebService - unable to use getFunctionalAnnotationChart with "count = 0"
rdavidwebservice
david
5.7 years ago
rdalbanus
• 0
13
votes
35
replies
16k
views
RDAVIDWebService Error 301: Moved Permanently
rdavidwebservice
david
updated 5.8 years ago by
gevermalc
• 0 • written 8.8 years ago by
Vivek.b
▴ 100
1
vote
4
replies
1.4k
views
Upregulation and Downregulation of Gene Ontology terms
microarray
david
differential gene expression
GO
6.1 years ago
seendey16
• 0
0
votes
0
replies
1.3k
views
gene over-representation analysis with custom background
pathway analysis
over-representation analysis
DAVID
pantherDB
consensuspathDB
7.4 years ago
smt8n
• 0
1
vote
0
replies
1.0k
views
How can I connect to DAVID 6.8 Beta through RDAVIDWebService
RDAVIDWebService
david
7.8 years ago
umut.caglar
▴ 10
3
votes
8
replies
10k
views
RDAVIDWebService - Unable to sendViaPost to url etc etc - server time out
software error
david
rdavidwebservice
updated 8.7 years ago by
oops324
• 0 • written 9.1 years ago by
TriS
▴ 200
0
votes
1
reply
1.8k
views
RDAVIDWebService Package - Uploading a gene list using data()
rdavidwebservice
david
differential gene expression
annotation
updated 9.2 years ago by
Dan Tenenbaum
★ 8.2k • written 9.2 years ago by
hpw9
• 0
8 results • Page
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Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
How am i making the data? I am using the DESeq2 output data which I had generated
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
by
Michael Love
41k
Sounds reasonable. For ranking genes, you could choose those with low decay rate but removing thoses where it is indistinguishable from …
Answer: Citation for edgeR user guide
by
Gordon Smyth
50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class?
by
James W. MacDonald
65k
What do you mean by 'the information'? Do you have things in particular that you want?
Votes
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
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