updated 4 months ago by
Ram
▴
180
•
written 5 months ago by
d.kozhevnikova
▴
10
1
vote
2
replies
394
views
Recent ...
Replies
Comment: Agilent Microarray Gene Oncology analysis gone wrong
by
SamGG
▴
320
Gordon said to let coef to its default value:
topTable(fit, n=20)
Comment: Can the limma package be applied to Log2 RUV-normalized data?
by
Shaimaa Gamal
•
0
Hi Gordon,
On what basis we can determine whether the dataset is large or not? I am working on a dataset of 515 samples and 5440 genes. I w…
Comment: Agilent Microarray Gene Oncology analysis gone wrong
by
samagbeyimodupe
•
0
Thank you for the quick response. i ran the codes again and removed all the other arguments for eBayes except for fit.
I ran the line of co…
Comment: Correct the batch effect in methylation analysis in R
by
Gordon Smyth
49k
> Is it okay to apply removeBatchEffect before a limma analysis(limma linear model)?
No, you should not apply any batch correction before …
Comment: Correct the batch effect in methylation analysis in R
by
kyj2226
•
0
Thank you for your response Gordon :)
I've already run the code below, just add batch to the limma linear model
design <- model.matri…
Awards
• All
Popular Question to
Gordon Smyth
49k
Popular Question to
Lluís Revilla Sancho
▴
720
Popular Question to
Frederik Ziebell
▴
20
Popular Question to
Sam
▴
10
Scholar to
Rory Stark
★
5.1k
Locations
• All
United States, 4 minutes ago
France, 55 minutes ago
United Kingdom, 1 hour ago
The city by the bay, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
United States, 4 minutes ago
France, 55 minutes ago
United Kingdom, 1 hour ago
The city by the bay, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
Traffic: 490 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6