Bioconductor DESeq2

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111

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DiffBind DESeq2 ATACSeq

updated 19 hours ago by ATpoint ★ 4.0k • written 2 days ago by lonn • 0

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189

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DESeq2

9 days ago • updated 8 hours ago Weiqian ▴ 10

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199

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DESeq2

updated 15 hours ago by Michael Love 41k • written 5 days ago by Rajat • 0

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352

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DESeq2

updated 11 hours ago by Michael Love 41k • written 9 weeks ago by Emma • 0

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2.1k

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deseq2

updated 11 hours ago by Seyram M. • 0 • written 4.6 years ago by hsbio ▴ 10

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666

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DESeq2

updated 12 hours ago by Michael Love 41k • written 5.0 years ago by Merlin ▴ 10

6 results • Page 1 of 1

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Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Popular Question to James W. MacDonald 65k