Biostar DEseq

Showing : DEseq • reset

vote

127

views

DESeq DESeq2

updated 5 weeks ago by Michael Love 35k • written 5 weeks ago by n.vandis • 0

votes

replies

330

views

r DESeq DESeq2

10 weeks ago • updated 9 weeks ago s-rhussien • 0

vote

replies

245

views

DESeq DESeq2 R

3 months ago • updated 12 weeks ago jbnrodriguez • 0

vote

replies

190

views

RNASeq DESeq

3 months ago krawczyk.margarita • 0

votes

replies

214

views

etLRT WALD edgeR DESEq

updated 3 months ago by Michael Love 35k • written 3 months ago by aiswaryabioinfo • 0

votes

149

views

RNAseq LFC DEseq

6 months ago ayy2110 • 0

vote

replies

287

views

DESeq metagene2 metagene

updated 8 months ago by ericfournier2 ▴ 10 • written 9 months ago by GM ▴ 10

votes

replies

411

views

DESeq2 MAplot deseq

updated 9 months ago by Michael Love 35k • written 9 months ago by sp • 0

votes

replies

480

views

DESeq2 ZINB zinbwave deseq

updated 10 months ago by Michael Love 35k • written 10 months ago by rowcyclecamp • 0

votes

replies

5.4k

views

rnaseq deseq2 deseq standard error confidence interval

updated 4 weeks ago by Michael Love 35k • written 5.7 years ago by lisa.crossman ▴ 10

votes

replies

8.7k

views

deseq differential gene expression statistics p-value

updated 9 months ago by Kai_Qi ▴ 10 • written 5.8 years ago by Giard ▴ 30

votes

replies

35k

views

deseq deseq2

updated 28 days ago by Michael Love 35k • written 7.1 years ago by francesca.defilippis ▴ 60

votes

replies

11k

views

edgeR DESeq edgeR DESeq

updated 8 months ago by mehdimerbah • 0 • written 8.7 years ago by dvir.tau@gmail.com ▴ 30

13 results • Page 1 of 1

Recent ...

Replies

Comment: Question about DESeq2 statistical analysis by sofia.hanas • 0

Hello Michael, Thanks for answering my question. It is not a design question. I just wanted to know: in the program in DESeq2, is the contr…

Comment: DESEQ2 Results log2fold and pvalue changes after removing genes by Bine ▴ 20

Thank you!

Comment: DESEQ2 Results log2fold and pvalue changes after removing genes by Bine ▴ 20

Thank you for clarifying.

Comment: Illumina Expression analysis from iDAT files by Đạt • 0

Dear Sean and Mike, I have same question as Sean asked. As I know, the beadarray package in R allow us the do the analysis from bead-level…

Answer: DESEQ2 Results log2fold and pvalue changes after removing genes by Michael Love 35k

Swbarnes is correct. The pvalue depends on the dispersion which borrows information across genes. Also the size factors could differ.

Votes

Answer: DESEQ2 Results log2fold and pvalue changes after removing genes

Comment: DESEQ2 Results log2fold and pvalue changes after removing genes

Answer: dba.contrast in DiffBind

Awards • All

Scholar to Michael Lawrence 11k

Supporter to Rory Stark ★ 4.2k