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DMRcate
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0
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70
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DMRcate error need at least two non-NA values to interpolate
DNAMethylation
DMRcate
15 days ago
Macsue
• 0
2
votes
6
replies
1.3k
views
How to get DMR for Infinium methylation EPIC v2
ChAMP
DMRcate
minfi
updated 16 days ago by
Tim Peters
▴ 170 • written 4 months ago by
rae.alshammari
▴ 10
0
votes
2
replies
425
views
EPIC array hg38 annotation?
minfi
DMRcate
10 weeks ago • updated 9 weeks ago
mycetes
• 0
0
votes
0
replies
118
views
What is the significance of DMR in DMRcate
DMRcate
10 weeks ago
chuanjiao6
• 0
3
votes
2
replies
253
views
Question about DMRcate
DMRcate
dmrcate
11 weeks ago
chuanjiao6
• 0
8
votes
7
replies
1.1k
views
Why is DMRcate not available for Bioconductor version 3.18?
DMRcate
written 4 months ago by
Daniel E. Weeks
▴ 30
0
votes
5
replies
581
views
error while running DMRcate
stattistics
epicarray
Epigenetics
DMRcate
updated 5 months ago by
James W. MacDonald
65k • written 5 months ago by
Jitendra
▴ 10
0
votes
1
reply
720
views
DMR.plot() Error in .local(.Object, ...) : Failed to obtain 'hguid' cookie
DMRcate
DMR.plot
updated 5 months ago by
shepherl
3.8k • written 5 months ago by
Chiara
• 0
3
votes
4
replies
816
views
DMRcate design
Epigenetics
EpigeneticsWorkflow
DMRcate
6 months ago
Jitendra
▴ 10
0
votes
1
reply
459
views
dmrcate needs at least two non-NA values to interpolate
miss
DMRcate
missMethyl
updated 8 months ago by
Tim Peters
▴ 170 • written 8 months ago by
b.curran
• 0
2
votes
6
replies
1.0k
views
cpg.annotate() in DMRcate error
DNAMethylation
methylationArrayAnalysis
DMRcate
MethylationArrayData
MethylationArray
updated 11 months ago by
Tim Peters
▴ 170 • written 11 months ago by
Grace
• 0
0
votes
11
replies
3.7k
views
bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype arguments
DMRcate
minfi
updated 11 weeks ago by
Tim Peters
▴ 170 • written 7.1 years ago by
Jenny Drnevich
★ 2.0k
12 results • Page
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Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
41k
"gene_counts_length_scaled.tsv file generated by the nf-core be exactly that?" No that is the counts scaled by the length. Counts + offset…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
These genes are fine. They are just the ones where, by chance, the sample variance is below the sample mean. It happens. DESeq2 brings thes…
Comment: DEG with low counts
by
Michael Love
41k
These counts are too low, only a few samples above a count of 10. So for typical RNA-seq data that is underpowered to call differences. It…
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
If the counts are too low it in one group then you can't make the comparison either way (whether they are filtered out or just under-powere…
Comment: Estimating Cell Counts for EPIC V2 array data
by
normawiedman059
• 0
0 [103] spam_2.9-1 doParallel_1.0.17 iterators_1.0.14 [106] foreach_1.5.2 beeswarm_0.4.0 tgp_2.4-20 [109] beanplot_1.3.1 fpc_2.2-9 dbscan_1…
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