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DNA
•
reset
0
votes
2
replies
472
views
find tandem repeats in DNA
DNA
repeats
14 months ago
me-nobody
• 0
0
votes
1
reply
742
views
TFBSTools and readFASTA
TFBSTools
DNASeqData
readFASTA
DNA
RStudio
updated 2.5 years ago by
James W. MacDonald
65k • written 2.5 years ago by
HELEN
• 0
1
vote
1
reply
1.1k
views
How to use ENCprime via coRdon with a custom background sequence set?
software
codon
usage
bias
dna
updated 4.4 years ago by
anamaria
▴ 10 • written 4.4 years ago by
jol.espinoz
▴ 40
0
votes
1
reply
590
views
what do these DNA alphabet means ? "-", "+", "."
DNA
alphabet
updated 5.1 years ago by
James W. MacDonald
65k • written 5.1 years ago by
fjia304
• 0
2
votes
3
replies
1.8k
views
Is it possible to import a multiple fasta alignemnt (.mfa) file into DECIPHER?
decipher
DNA
biostrings
updated 6.3 years ago by
Erik Wright
▴ 150 • written 6.3 years ago by
reubenmcgregor88
• 0
0
votes
5
replies
2.5k
views
How to prevent readDNAStringSet() function from switching masked sequences (lowercase) to uppercase sequence?
biostrings
mask
repeatmasker
DNA
updated 3.2 years ago by
ivantsers
• 0 • written 6.4 years ago by
beausoleilmo
• 0
0
votes
1
reply
1.3k
views
ABI HRM data analysis
ABI
sequence
DNA
melting
curve
updated 8.9 years ago by
Hervé Pagès
16k • written 8.9 years ago by
Prasanth
▴ 20
7 results • Page
1 of 1
Recent ...
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Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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