Showing : DNAMethylation • reset
3
votes
5
replies
2.1k
views
Why the LogFC and delta-beta value are different in ChAMP
DNAMethylation ChAMP
updated 8 weeks ago by • 0 • written 3.4 years ago by • 0
2
votes
6
replies
1.0k
views
cpg.annotate() in DMRcate error
DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray
updated 11 months ago by ▴ 170 • written 12 months ago by • 0
1
vote
4
replies
419
views
EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
DNAMethylation MethylationArray methylationArrayAnalysis illumina
10 weeks ago mikat • 0
1
vote
4
replies
352
views
limma design model for categorical variable
DNAMethylation limmaGUI biostatistics limma
updated 9 weeks ago by 50k • written 10 weeks ago by ▴ 10
0
votes
0
replies
70
views
DMRcate error need at least two non-NA values to interpolate
DNAMethylation DMRcate
15 days ago Macsue • 0
0
votes
1
reply
481
views
topGO() analysis of DMPs in missMethyl methylation analysis
DNAMethylation missMethyl Pathways
11 months ago Grace • 0
0
votes
1
reply
162
views
Sample-specific methylation values using QSEA
DNAMethylation cfMeDIP-seq cfDNA qsea
updated 4 weeks ago by • 0 • written 10 weeks ago by • 0
0
votes
6
replies
292
views
unable to access Annotationhub latest record
DNAMethylation AnnotationHub EPICv2manifest annotation
updated 9 days ago by ▴ 170 • written 17 days ago by • 0
0
votes
6
replies
158
views
Methylation Analysis experiment design using Limma
DNAMethylation limma methylationArrayAnalysis
updated 2 days ago by 50k • written 2 days ago by • 0
0
votes
1
reply
228
views
Error in GOmeth function of missMethyl when EPICv2 annotation is used
DNAMethylation GO MethylationArray missMethyl EPICv2
updated 6 weeks ago by ▴ 40 • written 6 weeks ago by • 0
0
votes
4
replies
355
views
Seeking Strategies for Managing Duplicate CpG Entries in EPIC v2 Manifest
DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest
updated 8 weeks ago by 65k • written 8 weeks ago by ▴ 10
11 results • Page 1 of 1
Recent ...
Replies
Answer: Cannabis and KEGGgraph by deeenes ▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Awards • All
Popular Question to James W. MacDonald 65k
Popular Question to shepherl 3.8k
Popular Question to BioinfGuru ▴ 30
Popular Question to Gordon Smyth 50k
Scholar to Peter Hickey ▴ 740
Locations • All
France, 9 minutes ago
WEHI, Melbourne, Australia, 24 minutes ago
UPF, Barcelona, Spain, 25 minutes ago
Heidelberg, 47 minutes ago
United States, 55 minutes ago
Traffic: 547 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6