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DNAsequence
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Calculate the number of SNP differences between sequences in multiple alignment
pairwisealignment
SNP
dnasequence
5.5 years ago
lordbleys
• 0
1
vote
9
replies
1.5k
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Handling DNA sequence loaded from a file
r
biostrings
DNAsequence
updated 8 weeks ago by
James W. MacDonald
60k • written 6.4 years ago by
Agaz Hussain Wani
▴ 260
2 results • Page
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Comment: errors in annotation
by
Josie
• 0
OK thanks James. I'll send off an email to GenBank, see if they feel inclined to correct some errors.
Answer: Conversion of UniProt to Ensembl
by
James W. MacDonald
60k
I will provide an example below. But first, there is a vignette for biomaRt (actually two), and it has extensive examples of how to use the…
Comment: the difference between getGEO and getGEOSuppFiles
by
Fatemeh
• 0
thank you!
Answer: the difference between getGEO and getGEOSuppFiles
by
James W. MacDonald
60k
When submitting data to GEO, you are supposed to provide both the raw data and a matrix of processed data. When you use `getGEO` you get th…
Comment: error running UniProt.ws
by
James W. MacDonald
60k
https://www.bioconductor.org/checkResults/3.15/bioc-LATEST/UniProt.ws/nebbiolo1-install.html
Votes
Answer: Error in Create switchAnalyzeRlist
Answer: Error in Create switchAnalyzeRlist
A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge
DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Gene symbol
Answer: the difference between getGEO and getGEOSuppFiles
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