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Job:
Research scientist in bioinformatics, Sweden
bioinformatics
data analysis
post doc
Job
5.1 years ago
mauno.vihinen
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Job:
Biostatistics Analyst (80-100%) at NEXUS Personalized Health Technologies, ETH Zurich, Switzerland
job
biostatistics
bioinformatics
data analysis
core facility
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5.7 years ago
Michael Prummer
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Job:
Post-doctoral Fellowship at BC Cancer Research Center, Vancouver BC
single cell
RNA
Data analysis
Bioinformatics
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5.7 years ago
jmaanaki
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Job:
Postdoctoral Research position in the Genomics of Cerebral Palsy (University of Adelaide, Australia)
Cerebral Palsy
bioinformatics
data analysis
Job
7.9 years ago
gammyknee
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1.9k
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Where to find open access microbiome data for case-control comparative study?
microbiome
data analysis
data request
updated 7.9 years ago by
Wolfgang Huber
★ 13k • written 7.9 years ago by
stats134711
• 0
1
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2
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3.4k
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Tutorial for RNA-Seq Data Analysis
rnaseq
data analysis
tutorial
workflows
differential gene expression
updated 7.9 years ago by
Aaron Lun
★ 28k • written 7.9 years ago by
Pranavathiyani G
• 0
1
vote
4
replies
2.1k
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New to mass spec data analysis
data analysis
xcms
Tutorial
updated 4 months ago by
abhisek001
• 0 • written 8.0 years ago by
Dan_reichert
• 0
7 results • Page
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Answer: Use of org.Rn.eg.db with GRCr8 reference genome
by
James W. MacDonald
68k
You've got it backwards. It should be ``` adult_res_df$symbol <- mapIds(org.Rn.eg.db, keys = rownames(adult_res_df), column = "ENSEMBL"…
Comment: DESeq2 swap ensembl gene id rownames with gene symbol column
by
Erika
• 0
Alternatively, you could have added a column with the common gene names. Assuming your dataframe `df` was created using `DESeq()`, somethin…
Answer: Clarification on GOALL / GO2ALLORFs mapping
by
James W. MacDonald
68k
It appears that 'negative regulation of glycogen biosynthesis' has an 'is a' relationship with 'glycogen biosynthetic process' https://www.…
Comment: Can't post a question?
by
DavideSant
• 0
Thank you, this was super useful!
Comment: Error in retrieving clinical data
by
silickas
• 0
Thank you for the reply. I will try to do that next time. This time instead, I used the GenomicDataCommons package to download clinical dat…
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Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
Help with creation of an OrgDB package and conduction of a bioinformatical analysis of gene expression
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
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