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Answer: edgeR : results from goana and kegga functions show opposite sig. p-value
by
James W. MacDonald
59k
It is not a valid assumption that a GO term and a KEGG term that appear to be the same are actually the same.
```
> library(org.Hs.eg.d…
Comment: help please！
by
shepherl
3.1k
what is the result of `.libPaths()` and `"AnnotationDbi" %in% rownames(installed.packages())`
Comment: DEXSeq: samples$sample_id %in% colnames(counts) is not TRUE
by
jeroen.gilis
▴
30
Hi phoebe1354,
Sorry for the late reply, will try to follow it up now (if still relevant).
Could you just give me `head(rownames(cts))` an…
Comment: DiffBind always reverts to default normalization
by
bers.anthrope
•
0
Thanks a lot, everything works now!
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