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News: Bioc2020 - Call for BOF/HAK/FAQ Sections
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4.1 years ago • updated 3.8 years ago shepherl 3.8k
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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4.1 years ago shepherl 3.8k
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News: Bioconductor 3.13 New Package Submission Deadline
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3.0 years ago shepherl 3.8k
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News: Deadline for devel branch 3.8 to pass R CMD build and R CMD check
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5.6 years ago shepherl 3.8k
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News: New Package Submission Deadline for Bioc Release 3.12
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3.6 years ago shepherl 3.8k
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News: Deadline for devel branch 3.9 to pass R CMD build and R CMD check
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5.1 years ago shepherl 3.8k
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News: Package Submission Deadline is TODAY!!
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5.6 years ago shepherl 3.8k
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News: Important Deadlines for RELEASE
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updated 4.5 years ago by 25k • written 4.5 years ago by 3.8k
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News: Import Deadlines for RELEASE 3.11
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4.0 years ago shepherl 3.8k
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News: Deadline for commits to current Release 3.7 Branch
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5.6 years ago shepherl 3.8k
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
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4.1 years ago shepherl 3.8k
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News: New Package Submission Deadline for Bioc Release 3.9
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5.1 years ago shepherl 3.8k
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News: Deadline for commits to current Release 3.9 Branch and Devel 3.10
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4.6 years ago shepherl 3.8k
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News: Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
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3.0 years ago shepherl 3.8k
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News: New Package Submission Deadline for Bioc Release 3.14
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2.6 years ago shepherl 3.8k
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News: Deadline for commits to current Release 3.8 Branch
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5.1 years ago shepherl 3.8k
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News: Package Submission Deadline is TODAY!!
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5.1 years ago shepherl 3.8k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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4.1 years ago shepherl 3.8k
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News: Package Submission Deadline is TODAY!!
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4.6 years ago shepherl 3.8k
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News: New Package Submission Deadline for Bioc Release 3.10
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4.6 years ago shepherl 3.8k
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News: Deadline for commits to current Release 3.9 Branch
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4.5 years ago shepherl 3.8k
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News: Bioconductor Release 3.10 Code Freeze Deadline
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4.1 years ago shepherl 3.8k
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News: Bioconductor 3.10 db0s are available
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4.5 years ago kayla.interdonato ▴ 160
23 results • Page 1 of 1
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Comment: Reproducibility issue with scran together with lapply and BiocParallel by ATpoint ★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
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C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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