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News: Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
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13 months ago • updated 12 months ago shepherl 3.1k
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News: Bioconductor 3.13 New Package Submission Deadline
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13 months ago shepherl 3.1k
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News: New Package Submission Deadline for Bioc Release 3.12
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20 months ago shepherl 3.1k
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections
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2.1 years ago • updated 23 months ago shepherl 3.1k
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News: Import Deadlines for RELEASE 3.11
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2.1 years ago shepherl 3.1k
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
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2.1 years ago shepherl 3.1k
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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2.2 years ago • updated 2.1 years ago shepherl 3.1k
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News: Bioconductor Release 3.10 Code Freeze Deadline
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2.1 years ago shepherl 3.1k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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2.2 years ago shepherl 3.1k
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News: Important Deadlines for RELEASE
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updated 2.6 years ago by 25k • written 2.6 years ago by 3.1k
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News: Bioconductor 3.10 db0s are available
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2.6 years ago kayla.interdonato 140
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News: Deadline for commits to current Release 3.9 Branch
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2.6 years ago shepherl 3.1k
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News: Package Submission Deadline is TODAY!!
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2.6 years ago shepherl 3.1k
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News: Deadline for commits to current Release 3.9 Branch and Devel 3.10
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2.6 years ago shepherl 3.1k
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News: New Package Submission Deadline for Bioc Release 3.10
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2.7 years ago shepherl 3.1k
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News: Deadline for devel branch 3.9 to pass R CMD build and R CMD check
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3.1 years ago shepherl 3.1k
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News: Package Submission Deadline is TODAY!!
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3.1 years ago shepherl 3.1k
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News: Deadline for commits to current Release 3.8 Branch
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3.1 years ago shepherl 3.1k
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News: New Package Submission Deadline for Bioc Release 3.9
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3.2 years ago shepherl 3.1k
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News: Package Submission Deadline is TODAY!!
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3.6 years ago shepherl 3.1k
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News: Deadline for devel branch 3.8 to pass R CMD build and R CMD check
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3.6 years ago shepherl 3.1k
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News: Deadline for commits to current Release 3.7 Branch
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3.6 years ago shepherl 3.1k
23 results • Page 1 of 1
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Comment: Warnings when using "ashr" in lfcshrinkage for DESeq2 by andrebolerbarros ▴ 10
Hi Michael, I'm using the "contrast" parameter, so I cannot use apeglm with that, as far as I know. The "coef" will not allow me to do eve…
Comment: Transcript-level differential expression using DESeq2 by Michael Love 36k
So the way the p-values are generated (non-parametric) you won't get a ranking among these that are highly significant. You can use logFC. …
Answer: Warnings when using "ashr" in lfcshrinkage for DESeq2 by Michael Love 36k
Note sure why it's having difficulty converging. You could use apeglm?
Comment: performing the differential binding in ChIP-seq by ATpoint ★ 1.2k
Cross-posted https://www.biostars.org/p/9524012/#9524012
Comment: Transcript-level differential expression using DESeq2 by Ekta • 0
Yes, i tried that. I used salmon bootstraps also for the same RNAseq data to run Swish and performed the Differential transcript expressio…
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Answer: how to make a group to apply the data to CAMERA
Answer: how to make a group to apply the data to CAMERA
Comment: Using vegan::betadisper for determing if I subset my design for DESeq2
Answer: How to best visualize multi-level transcriptomics experiment data?
A: Interpreting results of sample-to-sample PCA/clustering and changing assignment
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Scholar to Gordon Smyth 45k
Popular Question to andrebolerbarros ▴ 10
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Scholar to Guido Hooiveld ★ 3.2k
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