Bioconductor Deconvolution

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1.1k

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deconvolution r scRNAseq bioinformatics

2.2 years ago Hasan Alanya • 0

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1.0k

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deconvolution rnaseq psea

6.2 years ago WouterDeCoster ▴ 130

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893

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deconvolution methods

6.2 years ago casey.rimland ▴ 150

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1.1k

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deseq2 deconvolution rnaseq

updated 5.8 years ago by Michael Love 41k • written 5.9 years ago by jennyl.smith12 • 0

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1.3k

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deseq2 deconvolution normalization limma

updated 5.2 years ago by Michael Love 41k • written 5.2 years ago by bruce.moran ▴ 30

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727

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limma microarray deconvolution cell type

updated 4.2 years ago by Gordon Smyth 50k • written 4.2 years ago by antgomo • 0

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865

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methylCC deconvolution methylation dmrseq serum

4.0 years ago marcin.bazyliszek • 0

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647

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PSEA Deconvolution

3.8 years ago kavator ▴ 30

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1.6k

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deconvolution cellmix

8.9 years ago carleshf ▴ 10

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906

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Deconvolution

2.4 years ago Barista • 0

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2.2k

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deconvolution rna-seq

updated 8.5 years ago by Steve Lianoglou ★ 13k • written 8.5 years ago by Pauly Lin ▴ 150

11 results • Page 1 of 1

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Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) …

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Popular Question to James W. MacDonald 65k