updated 2 hours ago by
EChambers
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written 11 months ago by
Matthew Thornton
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Comment: Weird dispersion and volcano plots in DEA with paired samples
by
Michael Love
39k
I don't think there's any limit to the number of pairs, but for hundreds of coefficients to estimate, I personally would use limma-voom.
Answer: minfi support of illumina Infinium methylationEPIC v2.0
by
James W. MacDonald
62k
The annotation packages have not been generated by Bioconductor core, but a [long time contributor has done so][1]. You could install using…
Comment: Time-course, comparison of two groups
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boczniak767
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720
It is likely that I'm wrong, but I think that analysing time trends would be better than analysing each time point separately. It is intuit…
Comment: DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FU
by
EChambers
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0
Great fix, thank you!
Comment: Time-course, comparison of two groups
by
Gordon Smyth
47k
Anything is possible but splines will make the analysis more complex and there is no need for it. What makes you think you need splines?
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