Bioconductor Differential exon usage

Showing : Differential exon usage • reset

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3.3k

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edger normalization differential exon usage splicing

updated 4.6 years ago by Yunshun Chen ▴ 900 • written 4.6 years ago by oakhamwolf • 0

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1.7k

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DEXSeq differential exon usage

updated 6.9 years ago by Alejandro Reyes ★ 1.9k • written 6.9 years ago by A ▴ 60

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1.7k

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differential exon usage exon array analysis annotation hta2.0 diffsplice

updated 7.7 years ago by James W. MacDonald 68k • written 7.7 years ago by relathman ▴ 20

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egdeR multiple time points model.matrix differential exon usage model

7.8 years ago heikki.sarin ▴ 10

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2.0k

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dexseq differential exon usage

updated 8.2 years ago by mat.lesche ▴ 110 • written 8.2 years ago by Assa Yeroslaviz ★ 1.5k

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3.5k

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dexseq differential exon usage

8.3 years ago fizer ▴ 40

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3.9k

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deseq2 dexseq rnaseq differential gene expression differential exon usage

updated 8.4 years ago by Michael Love 43k • written 8.4 years ago by fizer ▴ 40

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942

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dexseq deseq2 differential exon usage

8.6 years ago ste.depo ▴ 10

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2.1k

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dexseq rsem differential exon usage differential gene expression

updated 8.9 years ago by James W. MacDonald 68k • written 8.9 years ago by Assa Yeroslaviz ★ 1.5k

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DEXSeq timecourse rna-seq differential exon usage

updated 9.2 years ago by Alejandro Reyes ★ 1.9k • written 9.2 years ago by MedwayC • 0

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1.9k

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DEXSeq differential exon usage exon usage

updated 9.4 years ago by Alejandro Reyes ★ 1.9k • written 9.4 years ago by biominer ▴ 10

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1.7k

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dexseq rnaseq differential exon usage

9.8 years ago arom2 • 0

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dexseq bitseq cuffdiff Differential exon usage isoforms

10.0 years ago • updated 9.9 years ago elle ▴ 10

13 results • Page 1 of 1

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Comment: Heatmap of a transformed deseq object with pheatmap by caroline.zanchi • 0

I used this argument in the second paragraph of code forthe heatmap, this is wehre I got the message Error in `[.default`(annotation_col, c…

Answer: Heatmap of a transformed deseq object with pheatmap by James W. MacDonald 68k

Ah, yes. The non-ASCII character error. My favorite! Please note that `pheatmap` is not a Bioconductor package, so you should be asking …

Comment: Heatmap of a transformed deseq object with pheatmap by caroline.zanchi • 0

It is in ! It just took longer than planned :) ... aaaand now that I added the heatmap in I realize lits of genes really do not look like t…

Comment: Heatmap of a transformed deseq object with pheatmap by James W. MacDonald 68k

You neglected to add the code you use to generate the heatmap.

Answer: Error in readCodelinkSet function by James W. MacDonald 68k

Please don't cross-post to Biostars. Either post here or there, but not both.

Votes

Comment: How to load scRNA-seq data from GEO

limma correction for tumor purity

Answer: limma correction for tumor purity

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