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DistanceToNearest
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2
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7
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distanceToNearest
rtracklayer
ranges
distanceToNearest
15 months ago
robjohn70000
• 0
2
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0
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996
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SOLVED. finding distance to nearest neighbour (non-self) within a list in GenomicRanges
GenomicRanges
GenomicFeatures
grange
distanceToNearest
R
5.5 years ago
rmash
▴ 20
0
votes
1
reply
1.4k
views
GenomicRanges distanceToNearest: trouble replicating snp-gene mapping from older version
GenomicRanges
distancetonearest
strandedness
updated 7.0 years ago by
Valerie Obenchain
★ 6.8k • written 7.0 years ago by
shraddha.pai
• 0
2
votes
5
replies
1.5k
views
DistanceToNearest Not giving nearest Range
GRanges
distancetonearest
updated 7.4 years ago by
Julie Zhu
★ 4.3k • written 7.4 years ago by
chitsazanalex
▴ 10
0
votes
5
replies
5.2k
views
Unable to find an inherited method for function distanceToNearest for signature GRanges
chipenrich
granges
distancetonearest
function
dataframe
7.5 years ago
rbronste
▴ 60
1
vote
14
replies
2.5k
views
DistanceToNearest() error: 'nLnode' and 'nRnode' must be single integers
genomicranges
DistanceToNearest
updated 8.6 years ago by
Valerie Obenchain
★ 6.8k • written 8.7 years ago by
roladali
▴ 20
6 results • Page
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Comment: Intepretation of results
by
Tom
• 0
[Locksmith Wombwell][1] I have been interested in using AUCell as a way to determine significantly enriched pathways in my single cell spat…
Comment: Gene Ontology (GO) Analysis
by
Tom
• 0
[Locksmith near me][1] Hello, I'm learning about Gene Ontology analysis. I'm trying to understand the difference between the hyperGTest fun…
Comment: DiffBind; Error: No sites have activity greater than filter value
by
etiennedanis
• 0
Same issue here as well. This is very weird because I never had this issue before. I started observing this issue with a new ATAC-seq da…
Comment: GSEA preranked analysis downstream of DEseq2
by
Ajay
• 0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file
by
janwilseo
• 0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
Votes
Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
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