Showing : EBSeq • reset
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Issue checking for convergence with the tutorial Dataset. EBseq 2.4.1
EBSeq
27 days ago Javier • 0
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EBTest error please add gene/isoform names to the data matrix
EBSeq
5.0 years ago lli2 • 0
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1.3k
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Heatmap for ebseq2 output
ebseq
6.0 years ago drkousi31 • 0
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1.3k
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DE analysis when large portion of transcriptome is changed
rna-seq edger ebseq differential expression
updated 6.9 years ago by ★ 28k • written 6.9 years ago by • 0
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[EBSEQ] Strange NA values
ebseq differential gene expression
8.9 years ago jean.keller ▴ 10
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1.2k
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[EBSeq] Normalization and DE genes detection
ebseq normalization differential gene expression
9.0 years ago jean.keller ▴ 10
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1.4k
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EBSeq-HMM: retrieving expression paths for genes differing by time AND treatment
ebseq ebseq-hmm rna-seq
9.5 years ago vieuphoria ▴ 10
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Matching New Samples to Differential Expression Profile
differential expression ebseq rnaseq
9.8 years ago jbarker2 • 0
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1.6k
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How to fully use the list of DEGs in non model species?
deseq2 gage ebseq rnaseq
9.9 years ago jackipchiho ▴ 10
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1.6k
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EBSeq package gives NaN Values for EBMultiTest
differential expression ebseq rnaseq
10.1 years ago jbarker2 • 0
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2
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3.2k
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DE analysis with reference transcriptome
Sequencing GO Organism edgeR DESeq EBSeq Sequencing GO Organism edgeR DESeq EBSeq
updated 11.0 years ago by 68k • written 11.0 years ago by ▴ 10
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1.9k
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TCC::ERROR: Need the design matrix for GLM
DifferentialExpression Normalization Cancer edgeR baySeq DESeq EBSeq TCC Normalization
updated 11.1 years ago by ▴ 10 • written 11.1 years ago by 52k
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2.1k
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TCC::ERROR: Need the design matrix for GLM.
DifferentialExpression Normalization Cancer edgeR baySeq DESeq EBSeq TCC Normalization
updated 11.1 years ago by ▴ 10 • written 11.1 years ago by ▴ 100
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EBSeq Results Affected By Outlying Values
EBSeq EBSeq
11.3 years ago Dario Strbenac ★ 1.6k
14 results • Page 1 of 1
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Comment: Heatmap of a transformed deseq object with pheatmap by caroline.zanchi • 0
I used this argument in the second paragraph of code forthe heatmap, this is wehre I got the message Error in `[.default`(annotation_col, c…
Answer: Heatmap of a transformed deseq object with pheatmap by James W. MacDonald 68k
Ah, yes. The non-ASCII character error. My favorite! Please note that `pheatmap` is not a Bioconductor package, so you should be asking …
Comment: Heatmap of a transformed deseq object with pheatmap by caroline.zanchi • 0
It is in ! It just took longer than planned :) ... aaaand now that I added the heatmap in I realize lits of genes really do not look like t…
Comment: Heatmap of a transformed deseq object with pheatmap by James W. MacDonald 68k
You neglected to add the code you use to generate the heatmap.
Answer: Error in readCodelinkSet function by James W. MacDonald 68k
Please don't cross-post to Biostars. Either post here or there, but not both.
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Comment: How to load scRNA-seq data from GEO
limma correction for tumor purity
limma correction for tumor purity
Answer: limma correction for tumor purity
Answer: limma correction for tumor purity
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