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ENmix
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2.4k
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problem installing ENmix package
ENmix
Bioconductor
rtracklayer
written 3.1 years ago by
lea
• 0
1
vote
2
replies
962
views
how to install ENmix github master branch on Ubuntu machine?
ENmix
written 7.7 years ago by
avilella
▴ 10
0
votes
0
replies
645
views
Help with ENmix readidat
ENmix
IlluminaHumanMethylationEPICmanifest
updated 23 months ago by
shepherl
3.8k • written 23 months ago by
Daphna
• 0
0
votes
0
replies
677
views
can ENmix::oxBS.MLE be run on comBat-adjusted data?
ENmix
comBat
3.0 years ago
joannew
• 0
0
votes
0
replies
547
views
ENmix: how to combine oxBS.MLE with RCP?
ENmix
3.1 years ago
joannew
• 0
0
votes
1
reply
829
views
could not find function "ComBat.mc"
ENmix
updated 3.4 years ago by
shepherl
3.8k • written 3.4 years ago by
ycding
▴ 10
1
vote
0
replies
587
views
Error in peak calling with Combp
ENmix
3.5 years ago
mwjnorris
▴ 10
0
votes
0
replies
637
views
Error for ENmix::bmiq.mc() on one sample
ENmix
5.1 years ago
moldach
▴ 20
0
votes
0
replies
1.1k
views
Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation
ENmix
BMIQ
wateRmelon
5.2 years ago • updated 5.1 years ago
moldach
▴ 20
0
votes
4
replies
1.8k
views
ComBat: Adjustment for 3experimental variables
ENmix
combat.mc
illumina450k
combat sva
7.8 years ago
DSP
• 0
10 results • Page
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Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Comment: Methylation Analysis experiment design using Limma
by
hortense96
• 0
Hi, Thank you very much for your answer. It's true that I only used 6 samples for this analysis, which is consistent with your explanation…
Comment: Error using champ.import
by
shilpa
• 0
I'm having same issues too. Did anyone manage to resolve it?
Answer: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
You don't explain how many samples you have (columns of data), but the warning message shown in your post would arise if there are in fact …
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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