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EPICarray
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champ.SVD() : Error in while (step == 0) { : missing value where TRUE/FALSE needed
methylationArrayAnalysis
EPICarray
ChAMP
Champ.SVD
16 months ago
arisarkar88
• 0
3
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4
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1.7k
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Error while using champ.svd() function in subset of data
ChAMP
methylationepic
epicarray
epigenomics
updated 4.9 years ago by
rcavalca
▴ 140 • written 4.9 years ago by
karthikrpad
▴ 10
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Is there any additional output / ERROR when you try ``` BiocManager::install("GenomeInfoDbData") ```
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Can you please show the command and all output when you try ``` BiocManager::install("DEP") ``` as well as the results from ``` sessionIn…
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Ok, I used plotMA() and it seems fine. Thanks ATpoint!
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Long story short, use `plotMA()` to see how normalization went. If the plot is somewhat symmetric and/or the majority of point center along…
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Comment: Detection of reference genes by Deseq2
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