Showing : EnrichGO • reset
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Problems with enrichGO
clusterProfiler enrichGO
updated 9 weeks ago by 41k • written 10 weeks ago by • 0
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5
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How to use EnrichGo of Cluster Profiler
EnrichGO clusterProfiler
written 3.3 years ago by • 0
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Simplify - clusterProfiler
RNASeq simplify clusterProfiler enrichGO simplifyEnrichment
19 months ago estafana.t98 • 0
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1.6k
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enrichGO results
clusterProfiler enrichGO
21 months ago Shakiba • 0
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1.5k
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Too many genes in GO term after enrichGO
clusterProfiler enrichGO clusterPro
2.4 years ago slimyMS • 0
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1.0k
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Using clusterProfiler for depletion analysis
clusterProfiler enrichGO
2.4 years ago samsiljee • 0
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1.8k
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Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R
enrichGO
2.9 years ago dailing57 • 0
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9.2k
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"No genes can be mapped...." using enrichGO in clusterProfiler
R TAIR clusterProfiler enrichGO Arabidopsis
updated 3.0 years ago by ★ 3.9k • written 3.0 years ago by • 0
2
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10
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keytype not supported in clusterprofiler when it is ensembl IDs?
clusterProfiler enrichGO
updated 4.0 years ago by 65k • written 4.0 years ago by ▴ 30
2
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8
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1.6k
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gene enrichment using enrichGO function throuth annotationHub orgDb
software error enrichGO annotationHub clusterProfiler Job
updated 4.0 years ago by 65k • written 4.0 years ago by • 0
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ClusterProfiler: enrichResult table with genes that do not have GO-term
ClusterProfiler enrichGO
updated 4.2 years ago by 65k • written 4.2 years ago by • 0
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How to select a specific onthology after runing enrichGO for all 3 onthology
enrichGO clusterprofiler
5.7 years ago MAP • 0
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6.6k
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How to export enrichGO results for future visualization with barplot, dotplot, emapplot...
clusterprofiler enrichGO barplot dotplot
5.7 years ago MAP • 0
1
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1
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1.2k
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clusterProfiler enrichGO under-represented term
clusterProfiler enrichGO
6.5 years ago Francois Marchildon ▴ 20
14 results • Page 1 of 1
Recent ...
Replies
Comment: DESeq filtering specific to contrasts by Michael Love 41k
Right, I was suggesting subsetting as a valid choice for "treatment and control samples at each timepoint"
Comment: DESeq filtering specific to contrasts by Carlin95 • 0
Fair enough, I guess it depends on the comparison being made, right? If one was interested in a feature comparing Timepoint A vs B, then it…
Comment: DESeq2 setting significant p-value by Dev • 0
Sir but when I put in the expression data via the csv file, it was showing the gene names then but now when i set it in the form factor it …
Answer: OrgDb for maize by James W. MacDonald 65k
``` > library(AnnotationHub) > hub <- AnnotationHub() |===========================| 100% snapshotDate(): 2023-10-23 > query(hu…
Comment: Which input file is used for DGEList in EgdeR? by i.atanasoai • 0
Understood, Thank you very much for the reply, very kind.
Votes
Install/Switch between multiple versions of R, Rstudio, and Bioconductor
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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