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EnrichmentBrowser

3 months ago yao.xiaosai • 0

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GeneTonic org.Sc.sgd.db pcaExplorer topGO EnrichmentBrowser

updated 11 months ago by Federico Marini ▴ 150 • written 11 months ago by chase.mateusiak • 0

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EnrichmentBrowser Oryza_sativa

19 months ago sjw • 0

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EnrichmentBrowser rnaseq

6.1 years ago aichen620 • 0

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genesetenrichment functional enrichment enrichmentbrowser News

7.0 years ago Ludwig Geistlinger ▴ 50

5 results • Page 1 of 1

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Answer: RUVr batch correction doubling number of DEGs by Michael Love 39k

No, this sounds like RUV is helping to reduce variance due to unaccounted for batch effects. So it’s helping.

Comment: Ascona Workshop “Biological systems: from first principles to data-driven model by Wolfgang Huber 13k

Dear Liam, it's bi-annual, we just submitted a proposal. If it works out, it'll be in 2024, and as it looks now, in early September. Theme:…

Comment: IHW for multiple regression by Wolfgang Huber 13k

Indeed, for the two-sided t-test (and similar), the sign of the test statistic is independent of the p-value under the null hypothesis, and…

Comment: edgeR supports continuous covariates? by Jeffcgen2000 • 0

Hi Yunshun Chen and Gordon Smyth, does edgeR support mixed model? (https://en.wikipedia.org/wiki/Mixed_model)

Comment: find tandem repeats in DNA by me-nobody • 0

OK. Thank you very much!

Votes

A: edgeR: exactTest, glmFIt or glmQLFit approach?

Answer: on which data type limma::removeBatchEffect can be applyed?

C: WGCNA: Understanding module-trait correlations

A: WGCNA: Understanding module-trait correlations

A: Differential expression analysis starting from TPM data

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