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EpicV2
•
reset
1
vote
2
replies
1.2k
views
CpGs with genomic positions greater than the chromosome size in EPICv2?
EPICv2
EPICv2manifest
7 weeks ago • updated 6 weeks ago
Joshua Llano
• 0
2
votes
7
replies
3.3k
views
Annotation for EPICv2
EpicV2
ChAMPdata
updated 6 months ago by
icecreamlover
• 0 • written 7 months ago by
nurkenber
• 0
1
vote
9
replies
3.5k
views
Error using champ.import
ChAMP
EPICv2
updated 6 months ago by
Ricky
• 0 • written 22 months ago by
medha.suman
• 0
0
votes
0
replies
320
views
DMRcate pcutoff setting
EpicV2
DMRcate
7 months ago
kitzhu
• 0
1
vote
3
replies
1.6k
views
SeSAMe DMR for EPIC V2
sesame
EPICv2manifest
epicv2
10 months ago
luca.s
▴ 50
0
votes
2
replies
1.1k
views
Combining analysis of EPICv1 and EPICv2 using SeSAMe package
sesameData
EPICv2
EPICv1
updated 7 months ago by
zhouwanding
▴ 20 • written 11 months ago by
archibold.mposhi
• 0
3
votes
2
replies
937
views
limma Intercept vs No-intercept models completely changing DMR results?
limma
DMRcate
MethylationArray
EPICV2
updated 11 months ago by
Gordon Smyth
52k • written 12 months ago by
Kim
• 0
1
vote
3
replies
1.9k
views
Error in GOmeth function of missMethyl when EPICv2 annotation is used
DNAMethylation
GO
MethylationArray
missMethyl
EPICv2
14 months ago • updated 7 months ago
s.malik
• 0
0
votes
4
replies
2.0k
views
Seeking Strategies for Managing Duplicate CpG Entries in EPIC v2 Manifest
DNAMethylation
EPICv2
IlluminaHumanMethylationEPICmanifest
updated 14 months ago by
James W. MacDonald
68k • written 14 months ago by
rae.alshammari
▴ 20
0
votes
4
replies
3.0k
views
ChAMP - obtaining beta values using EPICv2 annotation
ChAMP
EPICv2
updated 6 months ago by
icecreamlover
• 0 • written 16 months ago by
ChunkyJones
• 0
3
votes
5
replies
1.9k
views
Looking for equivalent EPIC chip v1 vs. v2 annotation variables
sesame
IlluminaHumanMethylationEPICv2anno.20a1.hg38
methylationEPICv2.0
EpicV2
updated 13 months ago by
aldea85
• 0 • written 18 months ago by
Courtney
▴ 10
1
vote
6
replies
3.0k
views
annotation EpicV2
minfiDataEPIC
EpicV2
updated 20 months ago by
Zuguang Gu
▴ 290 • written 20 months ago by
Izabela.ams
▴ 10
12 results • Page
1 of 1
Recent ...
Replies
Comment: Heatmap of a transformed deseq object with pheatmap
by
caroline.zanchi
• 0
I used this argument in the second paragraph of code forthe heatmap, this is wehre I got the message Error in `[.default`(annotation_col, c…
Answer: Heatmap of a transformed deseq object with pheatmap
by
James W. MacDonald
68k
Ah, yes. The non-ASCII character error. My favorite! Please note that `pheatmap` is not a Bioconductor package, so you should be asking …
Comment: Heatmap of a transformed deseq object with pheatmap
by
caroline.zanchi
• 0
It is in ! It just took longer than planned :) ... aaaand now that I added the heatmap in I realize lits of genes really do not look like t…
Comment: Heatmap of a transformed deseq object with pheatmap
by
James W. MacDonald
68k
You neglected to add the code you use to generate the heatmap.
Answer: Error in readCodelinkSet function
by
James W. MacDonald
68k
Please don't cross-post to Biostars. Either post here or there, but not both.
Votes
Comment: How to load scRNA-seq data from GEO
limma correction for tumor purity
limma correction for tumor purity
Answer: limma correction for tumor purity
Answer: limma correction for tumor purity
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