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EpicV2
•
reset
1
vote
2
replies
1.2k
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CpGs with genomic positions greater than the chromosome size in EPICv2?
EPICv2
EPICv2manifest
4 weeks ago • updated 23 days ago
Joshua Llano
• 0
2
votes
7
replies
3.0k
views
Annotation for EPICv2
EpicV2
ChAMPdata
updated 5 months ago by
icecreamlover
• 0 • written 6 months ago by
nurkenber
• 0
1
vote
9
replies
3.4k
views
Error using champ.import
ChAMP
EPICv2
updated 6 months ago by
Ricky
• 0 • written 21 months ago by
medha.suman
• 0
0
votes
0
replies
300
views
DMRcate pcutoff setting
EpicV2
DMRcate
6 months ago
kitzhu
• 0
1
vote
3
replies
1.5k
views
SeSAMe DMR for EPIC V2
sesame
EPICv2manifest
epicv2
9 months ago
luca.s
▴ 50
0
votes
2
replies
1.0k
views
Combining analysis of EPICv1 and EPICv2 using SeSAMe package
sesameData
EPICv2
EPICv1
updated 6 months ago by
zhouwanding
▴ 20 • written 10 months ago by
archibold.mposhi
• 0
3
votes
2
replies
916
views
limma Intercept vs No-intercept models completely changing DMR results?
limma
DMRcate
MethylationArray
EPICV2
updated 10 months ago by
Gordon Smyth
52k • written 11 months ago by
Kim
• 0
1
vote
3
replies
1.9k
views
Error in GOmeth function of missMethyl when EPICv2 annotation is used
DNAMethylation
GO
MethylationArray
missMethyl
EPICv2
13 months ago • updated 7 months ago
s.malik
• 0
0
votes
4
replies
2.9k
views
ChAMP - obtaining beta values using EPICv2 annotation
ChAMP
EPICv2
updated 5 months ago by
icecreamlover
• 0 • written 15 months ago by
ChunkyJones
• 0
9 results • Page
1 of 1
Recent ...
Replies
Comment: DeSeq Strategies for run to run Replication
by
Michael Love
43k
You shouldn't need to run `DESeq` on the test data, or manually compute normalization factors. ``` dds_test <- ... # create object dds_te…
Answer: Feature Counts - potential bug with outfile.jcounts
by
Wei Shi
★ 3.6k
We have made significant changes to how featureCounts annotates junctions detected in read mapping results. These updates are included in t…
Comment: How to perform batch correction on scRNA-seq with confounding plate effects?
by
瑞宏
• 0
I would like to share my own understanding: in single-cell RNA sequencing (scRNA-seq), batch correction is solely intended to identify the …
Comment: DiffBind can't find a DAR
by
Mengjun
• 0
Additionally, i checked my bigwig in igv, it shows that the ctrl_1 is more like ko_1, and ctrl_2's track is more like ko_2's track. Did an…
Comment: European Bioconductor Conference 2023 planning
by
ht
• 0
Great news about the European Bioconductor Conference 2023 planning! As someone who enjoys statistical computing and bioinformatics, I'm ex…
Votes
C: Annotating HTA 2.0 genes
C: Annotating HTA 2.0 genes
A: Annotating HTA 2.0 genes
A: Annotating HTA 2.0 genes
Answer: Feature Counts - potential bug with outfile.jcounts
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