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Error
•
reset
10
votes
5
replies
6.2k
views
Error: This function only works when used with the ensembl BioMart.
biomart
error
8.4 years ago
anchel.gonzalez
• 0
0
votes
6
replies
1.9k
views
BiSeq trimClusters error
biseq
error
trimClusters
updated 8.2 years ago by
Katja Hebestreit
▴ 130 • written 8.3 years ago by
kms68
• 0
0
votes
6
replies
7.9k
views
Rhtslib - install error
Rhtslib
installation
error
zlib
updated 4.6 years ago by
leoadam014
• 0 • written 5.5 years ago by
boboshaq
• 0
3
votes
4
replies
1.6k
views
seq2pathway error on Mac OS X
seq2pathway
error
python
mac os x
8.6 years ago
termanini
▴ 10
0
votes
3
replies
2.3k
views
incorrect biomaRt output order of gene list
biomart
ensembldb
error
6.1 years ago
Yuqia
• 0
0
votes
6
replies
3.5k
views
Error in using Pathview package. Do not print the pathways provided by GAGE analysis
gage
pathview
error
updated 7.8 years ago by
Luo Weijun
★ 1.6k • written 7.9 years ago by
marie.bordone
• 0
3
votes
4
replies
13k
views
converting ensembl transcript ID to ensemble gene: problem & missing values
biomart
error
ensembldb
6.2 years ago • updated 6.1 years ago
Yuqia
• 0
3
votes
14
replies
3.6k
views
biomaRt - Error in getBM: The query to the BioMart webservice returned an invalid result
biomart
error
ensembl
bioconductor
ensembl mart
6.9 years ago
daniel.carbajo
• 0
6
votes
6
replies
3.4k
views
Error in .checkKeys(value, Lkeys(x), x@ifnotfound)
Gostats
go term
annotation
drosophila melanogaster
error
updated 7.2 years ago by
tlaguna
▴ 10 • written 7.9 years ago by
nooshin
▴ 300
1
vote
7
replies
1.8k
views
Ballgown object construction error
ballgown
scan
error
package
6.9 years ago • updated 6.8 years ago
spaque57
• 0
1
vote
3
replies
2.2k
views
Pathview pathview kegg.native=TRUE throws error in img
pathview
kegg
error
bioconductor
rnaseq
updated 6.5 years ago by
map2085
▴ 40 • written 7.2 years ago by
guillermo.marco
▴ 30
0
votes
4
replies
1.5k
views
[biomaRt] getBM: Error when obtaining mim_morbid_description
biomart
getbm
error
9.2 years ago
Tibor Fulop
• 0
0
votes
4
replies
3.2k
views
GEOquery: Error Message
geoquery
error
updated 8.7 years ago by
contato.carlosbau
▴ 10 • written 8.8 years ago by
alakatos
▴ 130
0
votes
3
replies
2.6k
views
error installing cummeRbund in R studio (Windows desktop)
Rstudio
cummerbund
error
6.9 years ago
mszskb
• 0
1
vote
2
replies
1.5k
views
TCGABiolinks::GDCquery() suddenly sending back unknown error
software error
error
tcgabiolinks
GDCquery
updated 6.5 years ago by
eshelden
▴ 40 • written 6.5 years ago by
jrlarsen
▴ 10
10
votes
10
replies
6.5k
views
biomaRt not working - lazy table error
error
lazy
R
biomaRt
table
updated 4 weeks ago by
juo5
• 0 • written 5 months ago by
Abhishek
▴ 10
0
votes
4
replies
1.4k
views
error in import.exon.scheme, XPS package
xps
import.exon.scheme
error
rnadegradationplot
8.2 years ago • updated 8.1 years ago
Biologist
▴ 110
0
votes
5
replies
1.5k
views
readTranscriptFeatures from genomation
R
Rstudio
Error
readTranscriptFeatures
genomation
updated 4.4 years ago by
altuna akalin
▴ 20 • written 4.4 years ago by
hwaterma
• 0
4
votes
9
replies
3.7k
views
biomaRt - getBM; Error with obtaining a dataset from getBM() function
biomaRt
error
getBM
updated 2.9 years ago by
Mike Smith
★ 6.5k • written 3.2 years ago by
Zen
▴ 20
2
votes
5
replies
3.6k
views
GDCdownload does not work
GDCdow
tcgabiolinks
error
tcgadownload
download_error
updated 5.3 years ago by
Tiago Chedraoui Silva
▴ 260 • written 5.4 years ago by
miki716
• 0
3
votes
4
replies
2.8k
views
R Error: package ‘GenomeInfoDb’ could not be loaded on MacBook
error
mac
DESeq2
GenomeInfoDb
R
3.3 years ago • updated 3.2 years ago
Dan
▴ 20
1
vote
6
replies
2.4k
views
GoSeq SupportedGenomes error
goseq
unsupported organisms
supportedgenomes
supportedorganisms
error
updated 7.1 years ago by
Gordon Smyth
50k • written 7.1 years ago by
tootiki
• 0
0
votes
7
replies
5.5k
views
DESeq estimateSizeFactors() is returning error "Error: all(!is.na(value)) is not TRUE"
deseq2
error
R
estimatesizefactors
zero
updated 2.0 years ago by
LW
• 0 • written 6.6 years ago by
abhishek.yedugondla
• 0
1
vote
6
replies
3.5k
views
failed to load 'AnnotationHub' resource
annotationhub
annotation
error
8.3 years ago
elhananby
▴ 10
0
votes
17
replies
3.4k
views
What causes this DESeq2 error at "fitting model and testing"?
deseq2
differential expression
error
updated 10 months ago by
snow34
• 0 • written 6.6 years ago by
ap3637
• 0
1
vote
14
replies
1.2k
views
diffHic: Error while counting in predefined regions
error
7.6 years ago
manjulathimma
• 0
0
votes
3
replies
2.5k
views
Problems to create GmapGenome - gmapR
gmapR
GmapGenome
error
create
8.9 years ago
lelemraposo
• 0
2
votes
2
replies
1.1k
views
Deals with image value superior to 0,1 range
value
ebimage
writeImage
error
7.0 years ago
valerian.meline
• 0
0
votes
8
replies
1.8k
views
`bplapply` breaks down (BiocParallel_1.6.6, R 3.3.1, openSUSE Leap)
biocparallel
bplapply
Suse
error
process
updated 7.4 years ago by
jan.winter
• 0 • written 7.4 years ago by
schweringmarc01
• 0
3
votes
11
replies
3.9k
views
GEOquery http:// url error
geoquery
error
getgeo
microarray
geo
updated 6.3 years ago by
Sean Davis
21k • written 7.0 years ago by
jblack29
• 0
0
votes
6
replies
1.3k
views
DEsubs - Error in read.table during DEsubs command
DEsubs
error
updated 5.6 years ago by
Panos Balomenos
• 0 • written 5.7 years ago by
Talip Zengin
▴ 10
6
votes
6
replies
1.2k
views
Suggestion for next revision of edgeR User Guide re Design matrix setup
edger
error
updated 3.9 years ago by
Gordon Smyth
50k • written 3.9 years ago by
pdunn
• 0
1
vote
7
replies
2.5k
views
Error message from updated DESeq2
deseq2
beta prior
error
8.4 years ago
asaferali
• 0
0
votes
1
reply
3.7k
views
ERROR: lazy loading failed for package ‘org.Hs.eg.db’
org.hs.eg.db
annotationdbi
error
updated 9.0 years ago by
Dan Tenenbaum
★ 8.2k • written 9.0 years ago by
tina.khajeh
• 0
0
votes
1
reply
1.7k
views
RnBeads: Error in as.list.default(data.source) : no method for coercing this S4 class to a vector
rnbeads
error
as.vector(data)
s4vectors
s4
8.6 years ago
schasse
• 0
2
votes
1
reply
1.8k
views
'seqlevels(seqinfo(x))' and 'levels(seqnames(x))' are not identical
variantannotation
seqlevels
error
updated 9.6 years ago by
Valerie Obenchain
★ 6.8k • written 9.6 years ago by
Asma rabe
▴ 290
1
vote
11
replies
5.3k
views
DESeq2 error in evaluating the argument 'args' in selecting a method for function 'do.call'
deseq2
error
updated 8.6 years ago by
Michael Love
41k • written 8.6 years ago by
frankS
• 0
1
vote
2
replies
4.8k
views
ICU init failed: U_FILE_ACCESS_ERROR while loading library "VariantAnnotation"
variantannotation
library
error
updated 8.7 years ago by
Valerie Obenchain
★ 6.8k • written 8.7 years ago by
kmu004
▴ 50
1
vote
1
reply
1.6k
views
Error updating packages: couldn’t understand kern.osversion
package updates
error
updated 8.7 years ago by
Dan Tenenbaum
★ 8.2k • written 8.7 years ago by
sircoulombf
• 0
0
votes
1
reply
1.3k
views
LmFit and eBayes on merged ESET giving errors
limma
eset
error
ebayes
updated 8.8 years ago by
James W. MacDonald
65k • written 8.8 years ago by
Vani
▴ 20
0
votes
1
reply
2.0k
views
GO.db won't install for using goseq package
GO.db
goseq
package installation
error
updated 6.6 years ago by
Martin Morgan
25k • written 6.6 years ago by
veerle
• 0
0
votes
7
replies
3.0k
views
BiocInstaller wants version of R that is not available yet
bioconductor
error
biocinstaller
package installation
install
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
matt.s.leslie
• 0
1
vote
3
replies
5.4k
views
Error in cleanContrast
deseq2
r
error
updated 7.4 years ago by
Michael Love
41k • written 7.4 years ago by
lauren.fitch
• 0
0
votes
3
replies
1.3k
views
error while making database using Annotationforge package
annotationforge
error
database
updated 7.8 years ago by
Guido Hooiveld
★ 3.9k • written 7.8 years ago by
kritikamish99
▴ 10
0
votes
1
reply
1.8k
views
can't install workflow "rnaseqGene" with Bioconductor version3.3
bioconductor
workflowinstall
error
rnaseqgene
updated 7.9 years ago by
Valerie Obenchain
★ 6.8k • written 7.9 years ago by
cagenet34
▴ 20
2
votes
4
replies
8.5k
views
Limma LmFit() giving error: Error in lm.fit(design, t(M)) : incompatible dimension
limma
differential expression
design matrix
error
eset
updated 8.8 years ago by
Aaron Lun
★ 28k • written 8.8 years ago by
Vani
▴ 20
0
votes
5
replies
2.9k
views
Error in (function (classes, fdef, mtable) : unable to find an inherited method for function assayNames for signature "DESeqDataSet"
deseq2
error
updated 7.9 years ago by
Michael Love
41k • written 7.9 years ago by
nooshin
▴ 300
2
votes
2
replies
1.5k
views
TCGAbiolinks GDCprepare error
TCGAbiolinks
GDCprepare
error
updated 4.8 years ago by
Tiago C. Silva
▴ 270 • written 4.8 years ago by
Talip Zengin
▴ 10
1
vote
1
reply
1.5k
views
Minfi RGChannelSet preprocessing error in assayDataElement
minfi
preprocessing
error
updated 7.6 years ago by
Kasper Daniel Hansen
★ 6.5k • written 7.6 years ago by
lily
• 0
2
votes
2
replies
1.9k
views
Can I calculate counts from the base mean and log2fc outputs of DESeq2? Also, can I calculate error for counts values from lfcse output?
deseq2
chipseq
counts
log2fc
error
updated 7.9 years ago by
Michael Love
41k • written 7.9 years ago by
robin.uchiyama
• 0
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