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Error
•
reset
0
votes
17
replies
3.3k
views
Issue with easyRNASeq
easyRNASeq
error
9.6 years ago
ea11g0
• 0
0
votes
17
replies
4.2k
views
What causes this DESeq2 error at "fitting model and testing"?
deseq2
differential expression
error
updated 20 months ago by
snow34
• 0 • written 7.4 years ago by
ap3637
• 0
0
votes
14
replies
2.9k
views
annFUN error TOPGO
TOPGO
annFUN
error
updated 4.9 years ago by
Kevin Blighe
★ 4.0k • written 4.9 years ago by
eleonora.porcu
• 0
3
votes
14
replies
4.2k
views
biomaRt - Error in getBM: The query to the BioMart webservice returned an invalid result
biomart
error
ensembl
bioconductor
ensembl mart
7.7 years ago
daniel.carbajo
• 0
1
vote
14
replies
1.5k
views
diffHic: Error while counting in predefined regions
error
8.4 years ago
manjulathimma
• 0
2
votes
11
replies
6.6k
views
DESeq2 error in evaluating the argument 'args' in selecting a method for function 'do.call'
deseq2
error
updated 9.5 years ago by
Michael Love
43k • written 9.5 years ago by
frankS
▴ 10
3
votes
11
replies
4.7k
views
GEOquery http:// url error
geoquery
error
getgeo
microarray
geo
updated 7.1 years ago by
Sean Davis
21k • written 7.9 years ago by
jblack29
• 0
12
votes
10
replies
13k
views
biomaRt not working - lazy table error
error
lazy
R
biomaRt
table
updated 11 months ago by
juo5
• 0 • written 15 months ago by
Abhishek
▴ 20
4
votes
9
replies
4.3k
views
biomaRt - getBM; Error with obtaining a dataset from getBM() function
biomaRt
error
getBM
updated 3.7 years ago by
Mike Smith
★ 6.6k • written 4.0 years ago by
Zen
▴ 20
2
votes
9
replies
22k
views
DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE
deseq2
error
updated 3.4 years ago by
Michael Love
43k • written 7.6 years ago by
anpham
▴ 60
0
votes
8
replies
1.6k
views
fail to annotate chromosome data to single cell object
error
SingleCell
annotate
updated 15 months ago by
yw24418
• 0 • written 23 months ago by
sandra.garces.19
• 0
0
votes
8
replies
3.1k
views
tximport command error
tx2gene
txi
error
updated 5.8 years ago by
James W. MacDonald
68k • written 5.8 years ago by
eliztran
• 0
0
votes
8
replies
2.0k
views
`bplapply` breaks down (BiocParallel_1.6.6, R 3.3.1, openSUSE Leap)
biocparallel
bplapply
Suse
error
process
updated 8.2 years ago by
jan.winter
• 0 • written 8.2 years ago by
schweringmarc01
• 0
0
votes
8
replies
3.0k
views
Error in simpleLoess when running DEXSeq
DEX
error
simpleLoess
RNAseq
updated 10.4 years ago by
Alejandro Reyes
★ 1.9k • written 10.4 years ago by
cfreije
▴ 10
0
votes
7
replies
6.6k
views
DESeq estimateSizeFactors() is returning error "Error: all(!is.na(value)) is not TRUE"
deseq2
error
R
estimatesizefactors
zero
updated 2.9 years ago by
LW
• 0 • written 7.4 years ago by
abhishek.yedugondla
• 0
5
votes
7
replies
3.1k
views
Gage package; go.gset() function error: argument "go_id" is missing
gage package
error
updated 6.8 years ago by
James W. MacDonald
68k • written 6.8 years ago by
Miskey, Csaba
▴ 20
1
vote
7
replies
2.2k
views
Ballgown object construction error
ballgown
scan
error
package
7.7 years ago
spaque57
• 0
0
votes
7
replies
3.3k
views
BiocInstaller wants version of R that is not available yet
bioconductor
error
biocinstaller
package installation
install
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
matt.s.leslie
• 0
4
votes
7
replies
1.6k
views
bam files to hilbert curve
HilbertCurve
error
bamfiles
GRobject
5.4 years ago
adklts
• 0
0
votes
7
replies
3.3k
views
Graphics API Version Mismatch Error with DESeq2 and ggplot2 in RStudio on Ubuntu 22.04
error
RStudio
ggplot2
DESeq2
updated 15 months ago by
James W. MacDonald
68k • written 15 months ago by
BioES
• 0
1
vote
7
replies
2.8k
views
Error message from updated DESeq2
deseq2
beta prior
error
9.3 years ago
asaferali
• 0
0
votes
7
replies
1.8k
views
Centos 7.8, custom-compiled R-4.1: iPath_1.0.0 won't install
error
iPath
R
compilation
3.1 years ago
wjb2130
• 0
0
votes
6
replies
1.5k
views
DEsubs - Error in read.table during DEsubs command
DEsubs
error
updated 6.5 years ago by
Panos Balomenos
• 0 • written 6.5 years ago by
Talip
▴ 10
0
votes
6
replies
9.1k
views
Rhtslib - install error
Rhtslib
installation
error
zlib
updated 5.4 years ago by
leoadam014
• 0 • written 6.3 years ago by
boboshaq
• 0
6
votes
6
replies
1.6k
views
Suggestion for next revision of edgeR User Guide re Design matrix setup
edger
error
updated 4.7 years ago by
Gordon Smyth
52k • written 4.7 years ago by
pdunn
• 0
0
votes
6
replies
4.4k
views
Error in using Pathview package. Do not print the pathways provided by GAGE analysis
gage
pathview
error
updated 8.6 years ago by
Luo Weijun
★ 1.6k • written 8.7 years ago by
marie.bordone
• 0
2
votes
6
replies
2.4k
views
featurecounts Rsubread ERROR on exon_id
R
error
software error
Rsubread
featurecounts
updated 5.9 years ago by
Wei Shi
★ 3.6k • written 5.9 years ago by
edejong
• 0
1
vote
6
replies
2.7k
views
GoSeq SupportedGenomes error
goseq
unsupported organisms
supportedgenomes
supportedorganisms
error
updated 8.0 years ago by
Gordon Smyth
52k • written 8.0 years ago by
tootiki
• 0
0
votes
6
replies
2.3k
views
atacseqQC error while splittin the bamfile
ATACseqQC
ATAC-seq
error
split bam file
updated 5.8 years ago by
contact
• 0 • written 5.8 years ago by
Theo
▴ 10
0
votes
6
replies
2.2k
views
BiSeq trimClusters error
biseq
error
trimClusters
updated 9.0 years ago by
Katja Hebestreit
▴ 130 • written 9.1 years ago by
kms68
• 0
2
votes
6
replies
1.9k
views
EdgeR glmTreat error
edger
error
updated 5.9 years ago by
James W. MacDonald
68k • written 5.9 years ago by
lucap
• 0
1
vote
6
replies
4.0k
views
failed to load 'AnnotationHub' resource
annotationhub
annotation
error
9.2 years ago
elhananby
▴ 10
0
votes
6
replies
4.9k
views
Error in getOneSeqFromBSgenomeMultipleSequences During singeR tutorial
error
5.6 years ago
dfcarril
• 0
6
votes
6
replies
3.8k
views
Error in .checkKeys(value, Lkeys(x), x@ifnotfound)
Gostats
go term
annotation
drosophila melanogaster
error
updated 8.0 years ago by
tlaguna
▴ 10 • written 8.7 years ago by
nooshin
▴ 300
3
votes
5
replies
1.9k
views
CNV parameter not working - MEDIPS
medips
medip-seq
error
lukas
updated 7.8 years ago by
Matthias Lienhard
▴ 280 • written 7.8 years ago by
anupriyaverma1408
• 0
1
vote
5
replies
1.9k
views
How do I stop DESeq2 from loading and additional errors related to the package.
r
deseq2
error
updated 6.6 years ago by
Axel Klenk
★ 1.1k • written 6.6 years ago by
mdi3
• 0
2
votes
5
replies
4.5k
views
GDCdownload does not work
GDCdow
tcgabiolinks
error
tcgadownload
download_error
updated 6.2 years ago by
Tiago Chedraoui Silva
▴ 260 • written 6.2 years ago by
miki716
• 0
0
votes
5
replies
3.4k
views
Error in (function (classes, fdef, mtable) : unable to find an inherited method for function assayNames for signature "DESeqDataSet"
deseq2
error
updated 8.7 years ago by
Michael Love
43k • written 8.7 years ago by
nooshin
▴ 300
0
votes
5
replies
2.0k
views
readTranscriptFeatures from genomation
R
Rstudio
Error
readTranscriptFeatures
genomation
updated 5.2 years ago by
altuna akalin
▴ 20 • written 5.2 years ago by
hwaterma
• 0
5
votes
5
replies
7.0k
views
DESeq2 "DESeqDataSetFromMatrix" function has started to give me an error
deseq2
error
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
alextuck
▴ 30
0
votes
5
replies
2.3k
views
Flowclust install probelms on Ubuntu
flowclust
ubuntu
install
error
9.7 years ago
gareth.howell
• 0
10
votes
5
replies
6.8k
views
Error: This function only works when used with the ensembl BioMart.
biomart
error
9.3 years ago • updated 9.2 years ago
anchel.gonzalez
• 0
3
votes
4
replies
2.0k
views
seq2pathway error on Mac OS X
seq2pathway
error
python
mac os x
9.4 years ago
termanini
▴ 10
3
votes
4
replies
3.4k
views
R Error: package ‘GenomeInfoDb’ could not be loaded on MacBook
error
mac
DESeq2
GenomeInfoDb
R
4.1 years ago • updated 4.0 years ago
Dan
▴ 20
0
votes
4
replies
1.7k
views
[biomaRt] getBM: Error when obtaining mim_morbid_description
biomart
getbm
error
10.0 years ago
Tibor Fulop
• 0
3
votes
4
replies
15k
views
converting ensembl transcript ID to ensemble gene: problem & missing values
biomart
error
ensembldb
7.0 years ago
Yuqia
• 0
2
votes
4
replies
9.9k
views
Limma LmFit() giving error: Error in lm.fit(design, t(M)) : incompatible dimension
limma
differential expression
design matrix
error
eset
updated 9.6 years ago by
Aaron Lun
★ 28k • written 9.6 years ago by
Vani
▴ 20
0
votes
4
replies
3.7k
views
GEOquery: Error Message
geoquery
error
updated 9.5 years ago by
contato.carlosbau
▴ 10 • written 9.6 years ago by
alakatos
▴ 130
0
votes
4
replies
1.7k
views
error in import.exon.scheme, XPS package
xps
import.exon.scheme
error
rnadegradationplot
9.0 years ago
Biologist
▴ 120
0
votes
4
replies
1.2k
views
nucleR ERROR unable to find an inherited method for function peakDetection for signature
nucleosome
peaks
error
Job
updated 5.2 years ago by
James W. MacDonald
68k • written 5.2 years ago by
anne.kannengiesser
• 0
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