Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Filter
•
reset
1
vote
8
replies
3.7k
views
How to filter all column using Loop
loop
filter
written 6.4 years ago by
kritikamish99
▴ 10
3
votes
11
replies
3.4k
views
Filtering on present/absent calls methodology and perfect match only arrays
bioconductor
mas5
perfectmatch
affymetrixchip
filter
updated 9.1 years ago by
James W. MacDonald
65k • written 9.1 years ago by
svlachavas
▴ 830
0
votes
3
replies
2.6k
views
filtering out probes with no gene symbol from expressionSet
probe
filter
subset
gene symbol
affy
9.1 years ago
alakatos
▴ 130
3
votes
2
replies
1.3k
views
VariantAnnotation package, subseting vcfs on fixed fields
variantannotation
vcf
fixed
filter
9.2 years ago
Anna N.
• 0
2
votes
4
replies
3.1k
views
Filtering DGEList object in edgeR
DGElist
filter
edgeR
updated 6.7 years ago by
Gordon Smyth
50k • written 6.7 years ago by
alakatos
▴ 130
2
votes
2
replies
3.1k
views
DESeq: filter out low count reads
deseq
filter
reads
9.2 years ago
ccheung
• 0
1
vote
1
reply
738
views
Finding genes that are expressed only in one condition within a contrast
filter
deseq2
updated 5.0 years ago by
Michael Love
41k • written 5.0 years ago by
charles.foster
▴ 160
0
votes
1
reply
642
views
FlowCore openCyto: problem with summary(result)
flowCore
openCyto
Summary
Result
Filter
updated 3.9 years ago by
Jake Wagner
▴ 310 • written 4.0 years ago by
noviello
• 0
1
vote
2
replies
824
views
Filter by expression and keep probes in limma
R
filter
limma
Normalization
Microarray
11 months ago
Abdul
▴ 20
0
votes
3
replies
619
views
remving pseudogenes and lncRNA from deseq2 res
filter
deseq2
updated 11 months ago by
Michael Love
41k • written 11 months ago by
PD
• 0
0
votes
1
reply
1.3k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 8.5 years ago by
Jiang, Mike
★ 1.3k • written 8.5 years ago by
peterfoster
▴ 20
1
vote
1
reply
998
views
filter rows by missing values frequency
missing data
filter
updated 8.3 years ago by
James W. MacDonald
65k • written 8.3 years ago by
rgescudero
• 0
4
votes
2
replies
1.2k
views
limma; Only fit list of certain genes/ filter eSet
limma
filter
genelist
differential gene expression
updated 7.4 years ago by
Gordon Smyth
50k • written 7.4 years ago by
bi_Scholar
• 0
0
votes
1
reply
1.7k
views
Error in checkFullRank(modelMatrix) : the model matrix is not full rank, ?
deseq2
filter
genefilter
updated 6.4 years ago by
Michael Love
41k • written 6.4 years ago by
Björn
• 0
0
votes
1
reply
1.1k
views
How to filter gff based on certain gene list in rtracklayer?
rtracklayer
gff
filter
updated 5.1 years ago by
Michael Lawrence
★ 11k • written 5.1 years ago by
alslonik
• 0
0
votes
1
reply
513
views
openCyto's gate_quad_tmix broken when reading from gating template (and a bit more)
filter
gate_quad_tmix
gt_gating
2.0 years ago • updated 23 months ago
Pierre
• 0
1
vote
1
reply
1.3k
views
how to filter genes in significant module?
RNA
WGCNA
filter
4.7 years ago
modarzi
▴ 10
17 results • Page
1 of 1
Recent ...
Replies
Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Votes
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Awards
• All
Popular Question
to
michael.s
• 0
Popular Question
to
James W. MacDonald
65k
Popular Question
to
Pierre Lindenbaum
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Jenny Drnevich
★ 2.0k
Locations
• All
Macao,
just now
India,
9 minutes ago
Melbourne, Australia,
17 minutes ago
San Francisco,
18 minutes ago
Austria,
29 minutes ago
Traffic: 952 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6