Bioconductor FlowCore

Showing : FlowCore • reset

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105

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FlowCytometry flowWorkspace flowCore

5 weeks ago taylor.witte • 0

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241

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flowWorkspace flowCore CytoML

updated 4 weeks ago by SamGG ▴ 350 • written 9 weeks ago by jarod ▴ 30

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213

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flowDensity flowCore

3 months ago info ▴ 10

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877

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read.FCS flowCore

updated 4 months ago by SamGG ▴ 350 • written 4 months ago by das.traveller • 0

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362

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flowCore

updated 4 months ago by James W. MacDonald 65k • written 4 months ago by Gabriel ▴ 10

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415

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Partec read.FCS flowCore

5 months ago mrescan • 0

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372

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flowCore cytoMEM

9 months ago aguirre ▴ 20

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496

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Source flowCore Repository git

updated 12 months ago by shepherl 3.8k • written 12 months ago by dominic.r • 0

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1.6k

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ncdfFlow flowCore

updated 7 months ago by osayou • 0 • written 3.5 years ago by anders.tondell ▴ 30

9 results • Page 1 of 1

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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k

Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…

Answer: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by SamGG ▴ 350

I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k

That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by SamGG ▴ 350

Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…

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biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

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Scholar to James W. MacDonald 65k

Supporter to JKim • 0