updated 3.4 years ago by
sofie.vangassen
▴
10
•
written 3.5 years ago by
Václav
•
0
1
vote
6
replies
1.6k
views
1
vote
1
reply
469
views
1
vote
3
replies
516
views
updated 5 months ago by
SamGG
▴
350
•
written 5 months ago by
agus_rizzo
•
0
0
votes
0
replies
1.4k
views
3.5 years ago
domenico.somma
•
0
0
votes
0
replies
766
views
2.4 years ago
hbolouri
•
0
0
votes
0
replies
241
views
5 months ago
agus_rizzo
•
0
0
votes
2
replies
851
views
2.5 years ago
jakub.savara
•
0
0
votes
0
replies
899
views
2.8 years ago
ismail.ameran
•
0
0
votes
1
reply
1.1k
views
0
votes
2
replies
273
views
updated 4 months ago by
SamGG
▴
350
•
written 4 months ago by
agus_rizzo
•
0
0
votes
0
replies
1.4k
views
0
votes
1
reply
1.1k
views
5.0 years ago
fabrizio.benedetti.82
•
0
Recent ...
Replies
Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
41k
"gene_counts_length_scaled.tsv file generated by the nf-core be exactly that?"
No that is the counts scaled by the length. Counts + offset…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
These genes are fine. They are just the ones where, by chance, the sample variance is below the sample mean. It happens. DESeq2 brings thes…
Comment: DEG with low counts
by
Michael Love
41k
These counts are too low, only a few samples above a count of 10. So for typical RNA-seq data that is underpowered to call differences.
It…
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
If the counts are too low it in one group then you can't make the comparison either way (whether they are filtered out or just under-powere…
Comment: Estimating Cell Counts for EPIC V2 array data
by
normawiedman059
•
0
0
[103] spam_2.9-1 doParallel_1.0.17 iterators_1.0.14
[106] foreach_1.5.2 beeswarm_0.4.0 tgp_2.4-20
[109] beanplot_1.3.1 fpc_2.2-9 dbscan_1…
Votes
Awards
• All
Popular Question to
shepherl
3.8k
Popular Question to
BioinfGuru
▴
20
Popular Question to
Gordon Smyth
50k
Scholar to
Peter Hickey
▴
740
Popular Question to
sropri
•
0
Locations
• All
Netherlands, just now
France/Marseille/Inserm, 6 minutes ago
France, 8 minutes ago
UPF, Barcelona, Spain, 24 minutes ago
United States, 29 minutes ago
Netherlands, just now
France/Marseille/Inserm, 6 minutes ago
France, 8 minutes ago
UPF, Barcelona, Spain, 24 minutes ago
United States, 29 minutes ago
Traffic: 723 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6