Showing : FlowSOM • reset
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6
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Running FlowSOM in R problem
FlowSOM
updated 3.4 years ago by ▴ 10 • written 3.5 years ago by • 0
1
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3
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521
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FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 5 months ago by ▴ 350 • written 5 months ago by • 0
0
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2
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275
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FlowSOM error system.file()
FlowSOM
updated 5 months ago by ▴ 350 • written 5 months ago by • 0
0
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2
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852
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FlowSOM dependencies - cytoML and flowutils
FlowSOM
2.5 years ago jakub.savara • 0
0
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1
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1.1k
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multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore flowsom
7.6 years ago jeremyeadler • 0
0
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1
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1.1k
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[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
5.0 years ago fabrizio.benedetti.82 • 0
1
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1
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475
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FlowSOM with unrelated channels
FlowSOM cytofWorkflow
updated 13 months ago by ▴ 70 • written 13 months ago by • 0
0
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0
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1.4k
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FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom consensusclusterplus
7.1 years ago Lukas Weber • 0
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0
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241
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Identifying populations within a FlowSOM tree
FlowSOM
5 months ago agus_rizzo • 0
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0
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1.4k
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Error from FlowSom to Cytofast
Cytofast FlowSom CyTOF fcs files
3.5 years ago domenico.somma • 0
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0
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900
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Help with FlowSOM
FlowSOM
2.8 years ago ismail.ameran • 0
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0
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769
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Job: Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace CytoGLMM FlowSOM
2.4 years ago hbolouri • 0
12 results • Page 1 of 1
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Answer: Why p value inconsistent when using different number of pathway score? by ATpoint ★ 4.0k
Same answer as here: https://support.bioconductor.org/p/9157606/ Adding or removing data (samples, genes, pathways, observations...) chang…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0
Thanks Robert!
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Robert Castelo ★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph by deeenes ▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Votes
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
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