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FlowSom
•
reset
0
votes
2
replies
421
views
FlowSOM library requires igraph but igraph does not install
FlowSOM
written 7 months ago by
Priyanka
• 0
0
votes
2
replies
750
views
FlowSOM error system.file()
FlowSOM
updated 16 months ago by
SamGG
▴ 360 • written 16 months ago by
agus_rizzo
• 0
0
votes
0
replies
533
views
Identifying populations within a FlowSOM tree
FlowSOM
16 months ago
agus_rizzo
• 0
1
vote
3
replies
1.1k
views
FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 16 months ago by
SamGG
▴ 360 • written 16 months ago by
agus_rizzo
• 0
1
vote
1
reply
788
views
FlowSOM with unrelated channels
FlowSOM
cytofWorkflow
updated 24 months ago by
helucro
▴ 70 • written 24 months ago by
Anirban
• 0
0
votes
0
replies
1.0k
views
Job:
Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace
CytoGLMM
FlowSOM
3.3 years ago
hbolouri
• 0
0
votes
2
replies
1.1k
views
FlowSOM dependencies - cytoML and flowutils
FlowSOM
3.4 years ago
jakub.savara
• 0
0
votes
0
replies
1.2k
views
Help with FlowSOM
FlowSOM
3.7 years ago
ismail.ameran
• 0
1
vote
6
replies
2.1k
views
Running FlowSOM in R problem
FlowSOM
updated 4.4 years ago by
sofie.vangassen
▴ 10 • written 4.4 years ago by
Václav
• 0
0
votes
0
replies
1.7k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
4.4 years ago
domenico.somma
• 0
0
votes
1
reply
1.3k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.9 years ago
fabrizio.benedetti.82
• 0
0
votes
0
replies
1.7k
views
FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom
consensusclusterplus
8.0 years ago
Lukas Weber
• 0
0
votes
1
reply
1.3k
views
multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore
flowsom
8.6 years ago
jeremyeadler
• 0
13 results • Page
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Replies
Comment: Issue with DECIPHER::IdTaxa
by
Daniel
• 0
The issue is still there and it is a real pain. ape and ade4 are used by packages like Phyloseq. There should be a way to avoid these inc…
Comment: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
by
earntodiesaz
• 0
I'm delighted to have the chance to engage in conversation with your blog; I'm looking forward to reading more posts that can be relied upo…
Comment: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana
by
earntodiesaz
• 0
To be honest with you, I must say that it was an exceptionally good post. Writing it down and reading it during my lunch break was a very e…
Comment: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with
by
Gordon Smyth
52k
I generally recommend `block=individual` for unbalanced designs, to recover information from incomplete blocks. I would only be disuaded fr…
Comment: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with
by
Devin
▴ 10
Thank you, Gordon, for your responses to all of my questions. For analysis A), in the case when a patient has either a missing timepoint or…
Votes
Comment: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with
Answer: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with
Answer: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with
Answer: Using TPM from tximport of Salmon output for singscore
Comment: Using TPM from tximport of Salmon output for singscore
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