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GENOMICS
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6
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6.6k
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Error in DESeqDataSet(se, design = design, ignoreRank) : all variables in design formula must be columns in colData
deseq2
R
genomics
6.2 years ago
mokunf
• 0
3
votes
5
replies
3.1k
views
Element-wise setdiff when psetdiff fails for GenomicRanges
genomicranges
iranges
genomics
updated 9.3 years ago by
Michael Lawrence
▴ 60 • written 9.3 years ago by
Kipper Fletez-Brant
▴ 150
0
votes
0
replies
2.6k
views
Job:
Postdoc in Population Genomics - UC Davis
bioinformatics
evolution
sequencing
genome analysis
genomics
Job
5.5 years ago
hschmidt
• 0
3
votes
0
replies
2.6k
views
Job:
PhD opportunity in Cambridge (Computational Biology and Data Science)
cancer
deep learning
genomics
Job
computational biology
6.6 years ago • updated 6.4 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
2.4k
views
Job:
Full position as Bioinformatician at ETH Zurich in Personalized Medicine Data Fusion and Method Implementation
bioinformatics
personalized medicine
genomics
Job
9.5 years ago
Daniel Stekhoven
▴ 10
2
votes
0
replies
2.3k
views
Job:
Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics
genomics
transcriptomics
software
Job
4.6 years ago
Laurent Gatto
1.6k
1
vote
0
replies
2.2k
views
Job:
Postdoctoral/Senior Scientist Position in New York City- Mount Sinai School of Medicine
genomics
data integration
job
ngs
computational biology
Job
8.9 years ago
supindab
▴ 10
0
votes
0
replies
2.1k
views
Job:
Abbvie -- Senior Manager/Associate Director, Exploratory Statistics
genomics
genetics
proteomics
rnaseq
microarray
Job
9.1 years ago
Feng Hong
• 0
0
votes
0
replies
1.9k
views
Job:
Post-doc/Senior Scientist in Integrative Genomics: Mount Sinai School of Medicine, New York, NY
postdoc
genomics
Job
bioinformatician
computational biology
8.7 years ago
supindab
▴ 10
0
votes
0
replies
1.9k
views
Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
genomics
NGS
R
genetics
statistics
5.8 years ago • updated 3.4 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.9k
views
Job:
Harvard Medical School- Bioinformatics/Genomics signal processing Intern
genomics
bioinformatics
Job
9.4 years ago
Doe, Aimee
▴ 40
0
votes
0
replies
1.8k
views
Job:
Post-Doctoral Research Fellow - Patient Genomics Data Visualization
visualization
genomics
personalized medicine
systemsbiology
js
Job
9.1 years ago
Hamid Bolouri
▴ 50
1
vote
0
replies
1.8k
views
Job:
PostDoc at Novartis Oncology Basel - Intratumor heterogeneity
cancer
genomics
postdoc
job
Job
8.0 years ago
Kauffmann, Audrey
▴ 60
0
votes
0
replies
1.8k
views
Job:
Variant Curator/ Bioinformatics Scientist
genomics
Job
5.1 years ago
shira.rockowitz
▴ 10
0
votes
0
replies
1.8k
views
Job:
Data scientist/bioinformatician - Paris
Genomics
metabolomics
biostatistics
data integration
Job
8.5 years ago
David Enot
▴ 30
0
votes
0
replies
1.7k
views
Job:
Research Scientist in Bioinformatics/Statistical Genomics, Max Planck Institute, Nijmegen, Netherlands
job
rnaseq
rna-seq
genomics
data integration
Job
8.6 years ago
clyde.francks
• 0
0
votes
0
replies
1.7k
views
Job:
Bioinformatician / NGS Data Analyst (Stark Group, Vienna, Austria)
bioinformatician job
ngs
genomics
Job
9.0 years ago
stark
• 0
2
votes
3
replies
1.7k
views
ggbio tracks() function handling x axis in the wrong way
ggbio
ggplot2
tracks
genomics
plot
7.6 years ago
oswaldo.lorenzo
▴ 10
0
votes
0
replies
1.7k
views
Job:
Research Associate (Postdoctoral) position at the MRC Cancer Unit, University of Cambridge, UK.
job
computational biology
genomics
cancer
systemsbiology
Job
9.4 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
1.6k
views
Job:
Single Cell Cancer Genomics
cancer
single cell
genomics
Job
9.4 years ago
crispin.miller
• 0
0
votes
1
reply
1.6k
views
Job:
Bioinformatics Post-Doc Positions
cancer
BIOINFORMATICS
genomics
RNAseq
miRseq
Job
9.2 years ago • updated 9.1 years ago
aaron
• 0
1
vote
1
reply
1.6k
views
How to show chromosome position and SNP label at the same time in x axis
ggbio
ggplot2
genomics
plot
7.6 years ago
oswaldo.lorenzo
▴ 10
0
votes
0
replies
1.6k
views
Job:
Calling all Clinical Genomic Scientist
computational biology
genomics
genetics
Python
java
Job
8.8 years ago
careers
• 0
0
votes
0
replies
1.6k
views
Job:
Computational Biologist (Genome Statistical Analyst) position in CRUK Manchester Institute, UK
job
bioinformatics
ngs
genomics
statistics
Job
8.2 years ago
Hui Sun Leong
▴ 10
1
vote
0
replies
1.6k
views
Job:
Job Opening: Computational Biologists in Cambridge, MA and NYC
ngs
computational biology
R
genomics
bioinformatics
Job
8.5 years ago
mmartin
▴ 20
0
votes
0
replies
1.6k
views
Job:
Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer
translation
ngs
genomics
Job
9.1 years ago
jhjohnsn
• 0
0
votes
0
replies
1.5k
views
Job:
Research Scientist in Biostatistics/Bioinformatics
statistics
genetics
genomics
R
Job
7.2 years ago • updated 7.0 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.5k
views
Job:
Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics
job
genomics
postdoc
obesity
Job
7.2 years ago
njc65
• 0
1
vote
0
replies
1.5k
views
Job:
Research Assistant position (Fixed Term -12 months initially - application deadline 9th June) in Machine Learning & Computational Cancer Genomics @ …
cancer
deep learning
genomics
Job
5.0 years ago • updated 4.9 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
1.5k
views
Job:
Come apply for our Epidemiologist, AncestryHealth role
genomics
genetics
design
statistics
scientist
Job
8.8 years ago
careers
• 0
2
votes
0
replies
1.4k
views
Job:
Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job
GWAS
genetics
genomics
neuro
Job
7.8 years ago
enridomenici
▴ 10
1
vote
0
replies
1.4k
views
Job:
Bioinformatics Scientist at NEXUS Personalized Health Technologies in Zurich
clinicaldata
translational
genomics
diagnostics
research
Job
7.7 years ago
Daniel Stekhoven
▴ 10
0
votes
0
replies
1.3k
views
Job:
Postdoc in Bioinformatics for Cancer Genomics
cancer
genomics
bioinformatics
machine learning
next-generation sequencing
Job
6.9 years ago
yang4414
• 0
0
votes
0
replies
1.3k
views
Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
NGS
R
statistics
genomics
big data
Job
5.2 years ago • updated 4.4 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.3k
views
Job:
Bioinformatics Postdoc in Functional Evolutionary Genomics, Heidelberg, Germany
rnaseq
genomics
evolution
Job
8.1 years ago
henrik.kaessmann
• 0
1
vote
0
replies
1.3k
views
Job:
Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
computational biology
drug development
genomics
Job
7.0 years ago
mmartin
▴ 20
1
vote
0
replies
1.3k
views
Job:
Computational Biologist position in CRUK Manchester Institute, UK
ngs
prostate cancer
genomics
computational biology
bioinformatician job
Job
6.8 years ago
huisun.leong
▴ 10
0
votes
0
replies
1.3k
views
Job:
Bioinformaticist, Research Programmer
R
genomics
statistics
Job
7.2 years ago
radel
• 0
0
votes
0
replies
1.2k
views
Job:
Research Associate, Computational Biology / Bioinformatics, CRUK-CI, University of Cambridge, UK
bioinformatics
computational biology
chemical biology
genomics
Job
7.5 years ago
sergio.martinezcuesta
▴ 10
0
votes
0
replies
1.2k
views
Job:
postdoc 3yrs bioinformatics bacterial population genomics: Wellington, New Zealand
bacteria
evolution
population
genomics
Job
6.8 years ago
una.ren
• 0
0
votes
0
replies
1.2k
views
Job:
Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics
job
biostatistics
genomics
bioinformatics
Job
6.0 years ago
xzhousph
• 0
0
votes
0
replies
1.2k
views
Job:
Bioinformatician/Bioinformatics Data Analyst, CCRI Vienna, Austria
bioinformatician job
computational biology
cancer
genomics
job
Job
7.6 years ago
Max Kauer
▴ 140
1
vote
1
reply
1.2k
views
News:
Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology
go
ontology
bioinformatics
genomics
News
5.6 years ago
laurent.albou
• 0
3
votes
0
replies
1.1k
views
Job:
Postdoctoral Scientist position at intersection of Single-Cell Cancer Genomics, Data Science and Bioconductor Software Development
job
single-cell
data science
cancer
genomics
Job
5.3 years ago
Stephanie Hicks
▴ 80
0
votes
0
replies
1.1k
views
Job:
Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
job
biostatistics
data science
genomics
Job
5.1 years ago • updated 5.0 years ago
Patrick Kimes
▴ 10
0
votes
0
replies
1.1k
views
Job:
Postdoctoral Associate - Cancer Computational Biology
cancer
genomics
xenograph
cloud
Job
5.8 years ago
tyler.chukwu
• 0
0
votes
0
replies
1.1k
views
Job:
Postdoctoral Fellow position in Computational/Statistical Epigenomics @ Moffitt Cancer Center, Tampa, FL
genomics
bioinformatics
data science
cancer research
tampa
Job
3.8 years ago
tengmx
• 0
1
vote
0
replies
1.1k
views
Job:
2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics
genetics
machine learning
Job
5.5 years ago
gagneur
▴ 10
0
votes
0
replies
1.1k
views
Job:
Cancer Genomics Analysis Post
cancer
genomics
Job
9.4 years ago
crispin.miller
• 0
0
votes
0
replies
1.1k
views
Job:
R programmer position in genetic epidemiology/bioconductor
genetics
genomics
software
Job
3.5 years ago
Vincent J. Carey, Jr.
6.7k
50 results • Page
1 of 1
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Replies
Answer: Citation for edgeR user guide
by
Gordon Smyth
50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class?
by
James W. MacDonald
65k
What do you mean by 'the information'? Do you have things in particular that you want?
Comment: minfi::read.metharray.exp
by
clacarion
• 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp
by
clacarion
• 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Votes
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
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