Bioconductor GOTHiC

Showing : GOTHiC • reset

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1.4k

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diffhic gothic hicup hic-c hic

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by mictadlo ▴ 10

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892

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hic diffhic gothic hicup hic-c

5.4 years ago • updated 5.3 years ago mictadlo ▴ 10

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976

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GOTHiC

5.5 years ago alongalor ▴ 10

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791

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gothic

7.8 years ago manduchi ▴ 10

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1.6k

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GOTHiC hic

8.6 years ago Nathan Sheffield ▴ 10

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2.4k

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HiTC gothic diffhic HiC

8.6 years ago Bogdan ▴ 670

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3.6k

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bioconductor gothic R

updated 8.8 years ago by Vicky_Tche • 0 • written 8.9 years ago by sv380 • 0

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1.1k

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GOTHiC software error

9.0 years ago bef22 • 0

8 results • Page 1 of 1

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Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k

I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …

Comment: Theoretical WGCNA Question by Garrett • 0

Thanks Peter!

Comment: FGSEA pre-ranked input in increasing order or decreasing by sropri • 0

Thank you!

Comment: FGSEA pre-ranked input in increasing order or decreasing by alserg ▴ 240

They are reorder in the decreasing order.

Comment: significant difference of p-values with dream() after updating VariancePartition by Le • 0

Thanks for your reply @gabrielhoffman ! I've been trying to isolate the changes, and v1.32.5 had the same results as v1.33.1 while v1.30.0…

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Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Comment: DEXSeq DEXSeqDataSet count matrix duplication

Comment: Error in champ.load(): The following specified files do not exist

Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos

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