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GOslim
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reset
7
votes
9
replies
2.9k
views
GSEABase - View/extract GO terms mapped to each GOslim
go
GSEABase
GOslim
gene ontology
4.1 years ago • updated 12 months ago
samwhite
▴ 20
3
votes
4
replies
1.4k
views
GSEABase - Map gene/transcript IDs to GOslims?
gseabase
go
gene ontology
goslim
4.1 years ago • updated 12 months ago
samwhite
▴ 20
1
vote
1
reply
1.3k
views
Obtaining Go slim terms from biomaRt
biomaRt
goslim
go
updated 7.4 years ago by
Mike Smith
★ 6.5k • written 7.4 years ago by
rubi
▴ 110
0
votes
0
replies
1.3k
views
Create list of genes within each GOslim term
gene ontology
goslim
enrichment analysis
gene annotation
7.9 years ago
mirko
• 0
0
votes
2
replies
1.6k
views
Resolved- GSEAbase: goSlim function, pb with counts
GSEA
GO
goSlim
6.5 years ago
maeva.mollion
• 0
0
votes
8
replies
608
views
GOslim missing GO term
GO.db
GOslim
3 months ago
amanda
• 0
6 results • Page
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Recent ...
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Comment: DEG Filtering
by
Gordon Smyth
50k
I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
Votes
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
Answer: Microarray Limma Model fitting and DEG
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