Bioconductor GTF

3

votes

10

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5.6k

views

gtf

updated 2.8 years ago by Konstantinos Yeles ▴ 80 • written 2.8 years ago by pcantalupo ▴ 10

9

votes

9

replies

8.6k

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gtf

updated 5.7 years ago by lee.s ▴ 70 • written 5.7 years ago by Bogdan ▴ 670

2

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8

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1.7k

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AlternativeSplicing RNASeq IsoformSwitchAnalyzeR gtf

written 20 months ago by bpshtiwan ▴ 10

0

votes

7

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1.8k

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genomicfeatures maketxdbfromgff tx_type gtf

updated 8.4 years ago by Hervé Pagès 16k • written 8.4 years ago by Karolin Wiedemann • 0

1

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7

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1.1k

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annotationdata annotationhub ensembl gtf 2bit News

5.5 years ago shepherl 3.8k

1

vote

7

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3.1k

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dexseq gtf gff reference genome

updated 7.0 years ago by James W. MacDonald 65k • written 7.0 years ago by greg.mulhearn • 0

1

vote

6

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3.9k

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gtf sqlite mm9

9.4 years ago Patrick Schorderet ▴ 20

3

votes

4

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2.2k

views

dexseq gtf

updated 8.5 years ago by Alejandro Reyes ★ 1.9k • written 8.5 years ago by vakul.mohanty ▴ 10

0

votes

3

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2.0k

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gtf gff

8.7 years ago efratdahan21 • 0

1

vote

2

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1.2k

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rtracklayer gtf

8.5 years ago Mehmet Ilyas Cosacak • 0

2

votes

2

replies

800

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arabidopsis tximport gtf annotation

updated 5.1 years ago by Michael Love 41k • written 5.1 years ago by francoagp • 0

1

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2

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1.5k

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dexseq python gtf gff3 annotation

4.0 years ago Raito92 ▴ 60

2

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2

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1.1k

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tximport rat reference GTF salmon

3.8 years ago keremwai • 0

0

votes

2

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2.2k

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gtf TxDb maketxdbfromgff

updated 8.8 years ago by Hervé Pagès 16k • written 8.8 years ago by yacine.badis • 0

3

votes

2

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2.2k

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genomicfeatures gtf maketxdbfromgff iGenome

updated 7.4 years ago by Martin Morgan 25k • written 7.5 years ago by Marlin ▴ 20

0

votes

2

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2.1k

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genomicranges rtracklayer gtf gff export

6.9 years ago rubi ▴ 110

3

votes

2

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1.1k

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rtracklayer gff gtf import import.gff3

updated 6.8 years ago by Martin Morgan 25k • written 6.8 years ago by Marlin ▴ 20

0

votes

2

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1.5k

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summarizedexperiment TxDb gtf genomicfeatures

updated 6.8 years ago by Michael Love 41k • written 6.8 years ago by filipeje • 0

0

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2

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1.8k

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DEXseq gff prepare annotation gtf transcript_id

8.7 years ago arom2 • 0

0

votes

1

reply

851

views

gtfToExons "Error:subscriptcontainsinvalidnames" gtf branchpointer

updated 2.6 years ago by b.signal • 0 • written 2.6 years ago by frank.maiwald • 0

0

votes

0

replies

613

views

Subread GTF featureCounts segmentationfault

14 months ago yao hua • 0

0

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0

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1.2k

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genomicfeatures maketxdbfromgff tx_type gtf

8.4 years ago Karolin Wiedemann • 0

1

vote

0

replies

1.4k

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annotationhub ensembl gtf 2bit News

6.3 years ago shepherl 3.8k

0

votes

0

replies

973

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ensembl gtf 2bit annotationhub News

6.0 years ago shepherl 3.8k

0

votes

0

replies

940

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annotationhub ensembl gtf 2bit annotationdata News

5.7 years ago shepherl 3.8k

0

votes

0

replies

974

views

annotationhub annotationdata ensembl gtf 2bit News

5.2 years ago shepherl 3.8k

2

votes

0

replies

977

views

annotationdata annotationhub ensembl gtf 2bit News

updated 5.0 years ago by nguyenlieuduoc • 0 • written 5.0 years ago by shepherl 3.8k

0

votes

0

replies

267

views

stringtie IsoformSwitchAnalyzeR pfamAnalyzeR gtf

updated 4 months ago by James W. MacDonald 65k • written 4 months ago by sumitra.20 • 0