Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Gene List
•
reset
1
vote
1
reply
479
views
Obtain Protein-Protein Interaction (PPI) table from a list of Gene IDs in R or Python.
Protein Protein Interaction
Gene List
BioGRID
PICKLE
R Programming
3.8 years ago
omarrafiqued
▴ 50
1
vote
7
replies
1.1k
views
How do I discern if a magnitude difference in expression is up-regulation in one group or down-regulation in another?
edgeR
R
differential gene expression
up-regulation
gene list
updated 5.6 years ago by
Gordon Smyth
50k • written 5.6 years ago by
philip.freda
• 0
0
votes
0
replies
611
views
random gene list generator of given number and coding length
random generator
gene list
5.9 years ago
paul.hillman
• 0
3 results • Page
1 of 1
Recent ...
Replies
Answer: OrgDb for maize
by
Guido Hooiveld
★ 3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: Theoretical WGCNA Question
by
Garrett
• 0
Thanks Peter!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
sropri
• 0
Thank you!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
alserg
▴ 240
They are reorder in the decreasing order.
Comment: significant difference of p-values with dream() after updating VariancePartition
by
Le
• 0
Thanks for your reply @gabrielhoffman ! I've been trying to isolate the changes, and v1.32.5 had the same results as v1.33.1 while v1.30.0…
Votes
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos
Awards
• All
Scholar
to
Peter Hickey
▴ 740
Popular Question
to
sropri
• 0
Popular Question
to
W. Evan Johnson
▴ 850
Popular Question
to
Alejandro Reyes
★ 1.9k
Popular Question
to
shepherl
3.8k
Locations
• All
United States,
1 minute ago
United States,
6 minutes ago
France,
9 minutes ago
Hong Kong,
14 minutes ago
United States,
41 minutes ago
Traffic: 671 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6