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GenomeInfoDbData
•
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0
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6
replies
1.5k
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GenomeInfoDbData not available for Mac
bioconductor
GenomeInfoDbData
5.7 years ago
svetlana.gorokhova
• 0
8
votes
9
replies
1.1k
views
All three of the sites where genomeinfodbdata R packages are stored appear to be down.
GenomeInfoDbData
8 months ago
15753563659
▴ 50
1
vote
4
replies
3.9k
views
GenomeInfoDb’ could not be loaded or installed
GenomeInfoDbData
3.0 years ago
ettore64
▴ 10
1
vote
7
replies
17k
views
Dada2 and GenomeInfoDbData installation
dada2
GenomeInfoDbData
updated 6.8 years ago by
jiangjing_ing
• 0 • written 6.9 years ago by
navlern
• 0
0
votes
1
reply
352
views
GenomeInfoDbData version 1.2.9
GenomeInfoDbData
updated 6 months ago by
shepherl
3.8k • written 6 months ago by
remi.trimbour
• 0
0
votes
1
reply
1.8k
views
Issue using ballgown
software error
ballgown
genomeinfodbdata
genomeinfodb
updated 5.6 years ago by
James W. MacDonald
65k • written 5.6 years ago by
dualeahmed
• 0
0
votes
2
replies
960
views
Error when installing pcaExplorer
install
GenomeInfoDbData
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
lina.bird
• 0
0
votes
4
replies
1.7k
views
Cannot install Phyloseq and dada2
GenomeInfoDbData
phyloseq
dada2
2.3 years ago • updated 2.2 years ago
ymtan
• 0
0
votes
1
reply
674
views
package ‘GenomeInfoDb’ could not be loaded
GenomeInfoDb
GenomeInfoDbData
updated 13 months ago by
ATpoint
★ 4.0k • written 13 months ago by
exferin
• 0
0
votes
14
replies
4.0k
views
GenomeInfoDbData had non-zero exit status
DESeq2
RStudio
GenomeInfoDbData
hadnon-zeroexitstatus
updated 18 months ago by
wshao9
• 0 • written 21 months ago by
JoseR
• 0
2
votes
10
replies
1.3k
views
can't open mghp.osn.xsede.org
GenomeInfoDbData
genomeinfodbdata
updated 8 months ago by
James W. MacDonald
65k • written 8 months ago by
15753563659
▴ 50
1
vote
7
replies
4.4k
views
installation of package ‘GenomeInfoDbData’ had non-zero exit status
GenomeInfoDbData
"GenomeInfoDbData"package
updated 2.2 years ago by
Hervé Pagès
16k • written 3.4 years ago by
N.D.Hubot
• 0
0
votes
3
replies
1.6k
views
I cannot install "microbiome"
GenomeInfoDbData
microbiome
phyloseq
updated 20 months ago by
Marcel Ramos
690 • written 20 months ago by
kikiki
• 0
0
votes
0
replies
600
views
Error installing GenomeInfoDbData in order to run DESeq2
genomeinfodbdata
updated 5.1 years ago by
Martin Morgan
25k • written 5.1 years ago by
hdwhitti
• 0
1
vote
5
replies
1.2k
views
Unable to load mm10 genome for use with GenomicDistributions package
GenomeInfoDb
GenomeInfoDbData
GenomicDistributionsData
GenomicDistributions
22 months ago
rashford
• 0
15 results • Page
1 of 1
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Replies
Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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