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[SOLVED] Problem with the installation of Rgraphviz
Graphviz
Rgraphviz
2.8 years ago
c.bell.lu
• 0
4
votes
3
replies
2.3k
views
Pathview: Exporting non native KEGG pathway to PNG
pathview
bioconductor
graphics
graphviz
Pathview
updated 8.0 years ago by
dondelelcaro
▴ 10 • written 8.1 years ago by
guillermo.marco
▴ 30
0
votes
2
replies
1.6k
views
Pathview: Exporting non native KEGG pathway ignoring same.layer argument
Pathview
rgraphviz
graphviz
KEGG
updated 8.1 years ago by
Luo Weijun
★ 1.6k • written 8.1 years ago by
guillermo.marco
▴ 30
0
votes
0
replies
2.1k
views
Read Graphviz file .dot in R
r
rstudio
rgraphviz
graphviz
.dot
8.3 years ago
pleaseteachmehowtodoit
• 0
1
vote
1
reply
1.4k
views
embed url in pathview images
pathview
r
pdf
kegg
graphviz
updated 8.7 years ago by
Luo Weijun
★ 1.6k • written 8.8 years ago by
firstdayonthejob2003
• 0
3
votes
5
replies
2.5k
views
Explanation of warning output of pathview regarding visualization of a KEGG pathway with Graphviz format
pathview
clusterProfiler
KEGGpath
visualization
Graphviz
updated 8.8 years ago by
Luo Weijun
★ 1.6k • written 8.9 years ago by
svlachavas
▴ 830
0
votes
0
replies
1.3k
views
Rgraphviz: nodes with multiple colors
rgraphviz
graphviz
R
9.2 years ago
oliverfrings
• 0
7 results • Page
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Comment: When doing differential methylation using the sesame package, seems to only go
by
James W. MacDonald
67k
The odds ratio, not log FC. My bad.
Comment: When doing differential methylation using the sesame package, seems to only go
by
James W. MacDonald
67k
``` testResult$Eff_Condition > 0.1 ```
Comment: clusterProfiler: BgRatio N value does not match the size of the gene universe th
by
Fatima
• 0
I identified 3804 genes with GO annotations. I put my liste of genes in this link [enter link description here][1] universe <- mapIds…
Comment: When doing differential methylation using the sesame package, seems to only go
by
ramiro.barrantes
▴ 10
Hello, Thank you. I absolutely respect what you mention about p-values and logFC, I was just going to tackle that soon and thank you for po…
Comment: QSEA:Error in h(simpleError(msg, call))
by
kf
• 0
genome(qseaSet@regions)<-"BSgenome.Hsapiens.UCSC.hg38" solve the problem
Votes
Answer: Question: How to Set Up Contrasts for Case-Control Analysis in Limma While Adjus
Answer: Question: How to Set Up Contrasts for Case-Control Analysis in Limma While Adjus
Answer: clusterProfiler: BgRatio N value does not match the size of the gene universe th
Answer: object 'hdac_targets' not found
Answer: object 'hdac_targets' not found
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