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[SOLVED] Problem with the installation of Rgraphviz
Graphviz
Rgraphviz
2.4 years ago • updated 2.3 years ago
c.bell.lu
• 0
4
votes
3
replies
2.0k
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Pathview: Exporting non native KEGG pathway to PNG
pathview
bioconductor
graphics
graphviz
Pathview
updated 7.6 years ago by
dondelelcaro
▴ 10 • written 7.7 years ago by
guillermo.marco
▴ 30
0
votes
2
replies
1.4k
views
Pathview: Exporting non native KEGG pathway ignoring same.layer argument
Pathview
rgraphviz
graphviz
KEGG
updated 7.7 years ago by
Luo Weijun
★ 1.6k • written 7.7 years ago by
guillermo.marco
▴ 30
0
votes
0
replies
1.9k
views
Read Graphviz file .dot in R
r
rstudio
rgraphviz
graphviz
.dot
7.8 years ago
pleaseteachmehowtodoit
• 0
1
vote
1
reply
1.2k
views
embed url in pathview images
pathview
r
pdf
kegg
graphviz
updated 8.3 years ago by
Luo Weijun
★ 1.6k • written 8.3 years ago by
firstdayonthejob2003
• 0
3
votes
5
replies
2.3k
views
Explanation of warning output of pathview regarding visualization of a KEGG pathway with Graphviz format
pathview
clusterProfiler
KEGGpath
visualization
Graphviz
updated 8.4 years ago by
Luo Weijun
★ 1.6k • written 8.4 years ago by
svlachavas
▴ 830
0
votes
0
replies
1.2k
views
Rgraphviz: nodes with multiple colors
rgraphviz
graphviz
R
8.8 years ago
oliverfrings
• 0
7 results • Page
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Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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