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HapMap
•
reset
0
votes
8
replies
1.8k
views
mouse SNPs
SNP
Annotation
GO
HapMap
annotate
SNP
Annotation
GO
HapMap
annotate
13.6 years ago
Glazko, Galina
▴ 350
0
votes
2
replies
1.2k
views
error from rsamtools on 1000 genomes
Cancer
HapMap
Rsamtools
genomes
Cancer
HapMap
Rsamtools
genomes
updated 13.8 years ago by
Martin Morgan
25k • written 13.8 years ago by
Sergii Ivakhno
▴ 100
0
votes
3
replies
1.3k
views
Problem with justSNPRMA, library "oligo"
SNP
HapMap
SNP
HapMap
15.2 years ago
alessio boattini
▴ 30
0
votes
3
replies
1.1k
views
smlSet
SNP
HapMap
GGtools
SNP
HapMap
GGtools
updated 14.1 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.1 years ago by
claire pujoll
▴ 30
0
votes
2
replies
1.2k
views
Problems with oligo and pd.genomewidesnp.6
SNP
Annotation
HapMap
SNP
Annotation
HapMap
updated 15.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.9 years ago by
Jeremy Silver
▴ 10
0
votes
1
reply
1.5k
views
DiffBind & Chip-exo
HapMap
HapMap
10.7 years ago
Rory Stark
★ 5.1k
0
votes
1
reply
1.5k
views
biomaRt and HapMap
SNP
HapMap
biomaRt
SNP
HapMap
biomaRt
updated 12.8 years ago by
Steffen Durinck
▴ 540 • written 12.8 years ago by
Deidre
▴ 10
0
votes
2
replies
2.2k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Transcription
HapMap
PolyPhen
SIFT
convert
genomes
ensemblVEP
Transcription
HapMap
SIFT
updated 10.3 years ago by
Valerie Obenchain
★ 6.8k • written 10.3 years ago by
Thomas Sandmann
▴ 30
2
votes
3
replies
5.1k
views
Linkage disequilibrium with 1000 Genomes/HapMap
HapMap
genomes
HapMap
genomes
9.8 years ago
enricoferrero
▴ 660
0
votes
3
replies
1.2k
views
HapMap gene list
GO
HapMap
GO
HapMap
updated 13.7 years ago by
Kasper Daniel Hansen
★ 6.5k • written 13.7 years ago by
noxyport@gmail.com
▴ 20
0
votes
1
reply
1.3k
views
Help for snpMatrix
HapMap
HapMap
updated 12.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.2 years ago by
MLSC MANIPAL
▴ 120
0
votes
1
reply
1.0k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
updated 15.9 years ago by
Steffen
▴ 500 • written 15.9 years ago by
Richard Pearson
▴ 390
0
votes
2
replies
1.2k
views
Strange output in GenABEL convert.snp.ped()
SNP
HapMap
SNP
HapMap
updated 14.2 years ago by
Martin Morgan
25k • written 14.2 years ago by
Paul Geeleher
★ 1.3k
0
votes
0
replies
646
views
Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
2.7 years ago
Negar
• 0
0
votes
0
replies
1.4k
views
SNPs in High Linkage Disequilibrium
SNP
HapMap
SNP
HapMap
14.8 years ago
palermogp@libero.it
▴ 10
0
votes
0
replies
718
views
Hapmap miRNA expression data
miRNA
HapMap
ArrayExpress
miRNA
HapMap
ArrayExpress
14.4 years ago
Paul Geeleher
★ 1.3k
0
votes
0
replies
1.2k
views
Illumina CanineHD CNV & crlmm?
GO
HapMap
cdf
affy
crlmm
GO
HapMap
cdf
affy
crlmm
13.4 years ago
Matthew Ritchie
▴ 1000
0
votes
0
replies
2.7k
views
Limma - RNA-Seq DE genes - Quantile normalized log transformed RPKM data
HapMap
limma
HapMap
limma
12.4 years ago
Gordon Smyth
50k
0
votes
0
replies
902
views
Help to access hapmap using biomart
HapMap
biomaRt
HapMap
biomaRt
12.2 years ago
MLSC MANIPAL
▴ 120
0
votes
0
replies
869
views
How to make Illumina cluster files from HapMap
HapMap
HapMap
11.9 years ago
JiangZhengyu
▴ 40
0
votes
0
replies
1.3k
views
the set of SNPs difference between Genome build 37.1 and 37.3
SNP
HapMap
SNP
HapMap
11.6 years ago
shirley zhang
★ 1.0k
0
votes
0
replies
997
views
Problem in reading SNP hapmap data
SNP
HapMap
SNP
HapMap
10.6 years ago
Xiaolian Yuan
▴ 30
0
votes
0
replies
838
views
Access HapMap from biomart
hapmap
8.3 years ago
jaganmutyala
• 0
0
votes
0
replies
965
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
17.2 years ago
Steffen Durinck
▴ 580
24 results • Page
1 of 1
Recent ...
Replies
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Robert Castelo
★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Awards
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Scholar
to
Robert Castelo
★ 3.2k
Popular Question
to
James W. MacDonald
65k
Popular Question
to
shepherl
3.8k
Popular Question
to
BioinfGuru
▴ 30
Popular Question
to
Gordon Smyth
50k
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