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HiTC
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HiTC import is throwing error
HiTC
importC
sparseMatrix
27 days ago • updated 21 days ago
shikha
• 0
1
vote
3
replies
568
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A/B compartments computation: control settings
HiTC
updated 11 months ago by
ahmed.abbaselmahdi
• 0 • written 3.0 years ago by
Konstantin Okonechnikov
▴ 40
2 results • Page
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Answer: Can´t install GenomicRanges and rtracklayer
by
James W. MacDonald
60k
You can't just call `BiocManager::install()` and expect it to know what you want to install! You need to specify the packages you want as a…
Comment: why org.Hs.egGO2ALLEGS contain genes number difference from GO database?
by
pengmin.wang.1
• 0
yes, I also find genes in org.Bt.egGO2ALLEGS (bovine) are always less than online GO database in the same term. So do you know how to get t…
Comment: how to get gene list for given GO terms?
by
pengmin.wang.1
• 0
Hi, do you know how to get the gene list that have annotations from online GO database. For example, y <- as.list(org.Bt.egGO2ALLEGS), y co…
Comment: RSEM - tximport; where is effective_length information used? Implications for sc
by
Kelen
• 0
Thank you. Gene-level analysis. I don't yet have a specific downstream pipeline in mind - I am trying to understand what limitations I migh…
Comment: FeaturePlot in scater
by
Guandong Shang
▴ 20
Thanks, this is what I want!
Votes
A: paired and unpaired test at the same time with voom limma
Comment: Duplicate correlation with limma in before-after exposure experiment
Answer: Using Age or other numerical variable to model expression in deseq2
Comment: Using Age or other numerical variable to model expression in deseq2
Comment: Using Age or other numerical variable to model expression in deseq2
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Jenny Drnevich
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