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tropicalis
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9.6 years ago
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updated 11.1 years ago by
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written 11.1 years ago by
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Comment: Improving performance of edgeR and limma while adjusting for multiple confounder
by
ATpoint
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4.8k
If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…
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Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …
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We recommend that you use voomLmFit() instead of voom+lmFit.
We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…
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It appears that [SeSAMe][1] has functions meant to do that sort of thing.
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